Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1765 ATGAGTGAAATACCTTCTCACATGAAAGCGTGGACGTATTCAGAGTATGGCCAATCCTCTCAAGTTCTCAAGTTTAATCATAACGTGACTTTACCTGAGATGAAGGATGACCAGGTTCTCATCAAAGTCGCTGCTGCTTCCCTTAACCCCATTGATTATAAGAGAATGGAAGGCCACTTCAAGAACACTGACTCCCCTTTACCTACTGCTCCAGGATACGATGTTGCTGGAGTGGTGGTTAAAGTGGGAAGTCAAGTGAAGAAATTTAAGGTTGGGGATGAAGTTTATGGGGATATCAATGTGAAAGCTTTGGAATTTCCAAAGGTCATTGGTTCTTTGGCAGAGTACACTACTTCAGAAGAGAGACTATTGGCTCACAAGCCAAAGAATCTGAGCTTTGCTGAGGCTGCTAGCCTTCCTCTAACAATTGAGACTGCATACGAAGGCCTTGAGCGATCTGGGTTTTCTGCTGGAAAATCTATCCTTGTGCTTGGAGGTGCTGGTGGAGTTGGAACTCATGTTATTCAGCTTGCCAAGCATGTTTATGGAGCATCCAAGGTAGCAGCCACAGCTAGCACTAAGAAACTTGAATTGTTGAGGAGTTTGGGAGCTGACTTGGCTATAGATTATACAAAGCAGAATTTCGAGGACTTGCCTGAAAAGTATGATGTGGTGTATGATACAGTAGGGCAGACTGAACAGGCATTCACGGCTTTGAAAGAAGGAGGCAAAGTTGTGACAATAGTACCACCTGGATTTCCACCGGCTATTCTTTTCATACTCACTACTGATGGGGCTATCTTAGAGAAACTAAACCCCTACTTGGAGAGTGGTAAGGTGAAGCCGGTACTGGACCCAAAGAGCCCGTTTCCATTTTCTCAGACTGTTGAAGCATTTTCCTATCTGGAAACAAACAGAGCCACTGGGAAAGTAGTCATATATCCCATTCCATGA 954 0.4423 MSEIPSHMKAWTYSEYGQSSQVLKFNHNVTLPEMKDDQVLIKVAAASLNPIDYKRMEGHFKNTDSPLPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDINVKALEFPKVIGSLAEYTTSEERLLAHKPKNLSFAEAASLPLTIETAYEGLERSGFSAGKSILVLGGAGGVGTHVIQLAKHVYGASKVAATASTKKLELLRSLGADLAIDYTKQNFEDLPEKYDVVYDTVGQTEQAFTALKEGGKVVTIVPPGFPPAILFILTTDGAILEKLNPYLESGKVKPVLDPKSPFPFSQTVEAFSYLETNRATGKVVIYPIP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1765 317 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 317 IPR044626 GO:0016628
Apr4g1765 317 SUPERFAMILY GroES-like 5 165 IPR011032 -
Apr4g1765 317 SMART PKS_ER_names_mod 18 313 IPR020843 GO:0016491
Apr4g1765 317 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 3 317 - -
Apr4g1765 317 CDD MDR_like_2 8 313 - -
Apr4g1765 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 257 IPR036291 -
Apr4g1765 317 Pfam Alcohol dehydrogenase GroES-like domain 37 102 IPR013154 -
Apr4g1765 317 Pfam Zinc-binding dehydrogenase 202 313 - -
Apr4g1765 317 Gene3D - 150 264 - -
Apr4g1765 317 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 158 179 IPR002364 GO:0008270|GO:0016491
Apr4g1765 317 Gene3D - 15 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1765 Apr-Chr4 23519455 23522227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1765 68 254 Monolignol Biosynthesis Gene Families AT4G37980 26.267 5.30e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1765 K18980 - gmx:100817947 541.191