Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1759 ATGGCACTCCTACCAAACTTGCCAATCTTAGTTATTTTTCTTGCTATGATCTTTACATGTCTTGCACAAGTTGAGCCATCCAGGGCTGGGCATAACAGGCAAAACCAAACCCAAACAATGGGCTACATAGAGTCCTCTTGCAATAGCACTCGATACCCTGATCTGTGCATACGTTGCCTGGCCAGATTTGCCAATTACAACATCGATAATGGCCCTAAGGACTTAGTCCATGTAGCTCTTTCCGTGAGCCTCACGAGGGCACTACAAACAAGGGGTTACCTGTTGAAAGTGACCAAAGAACTTGAGGAATTCAATATTGGCAAAGTGTACCTTACTATTCAAGATTGCTTGACGCTAATCAATGATAGTGTGGACCAACTTAGCCAAGCCATCAAAGAGCTCCGCAGGCTAGACAAGCGCACCATCATAGACGATCGTTTCTTGTGGCAAATAAGCAACGTCGAGACATGGGTGAGCACTGCCTTAACAGATGCAAGCTATTGTGTACAATCGTTCCCTGGTCAAAGGATGAGTAAGAGAACTGCTACTATAAAGGTTAAGGCGCAAAATGTTGCCGAAGTCACTAGTATTGCACTAGCCTTGTTTCATAGATATGCTTCCAGGTACCAAGCGGCAGCTAGAGCCACCAAGGTACCATAA 660 0.4515 MALLPNLPILVIFLAMIFTCLAQVEPSRAGHNRQNQTQTMGYIESSCNSTRYPDLCIRCLARFANYNIDNGPKDLVHVALSVSLTRALQTRGYLLKVTKELEEFNIGKVYLTIQDCLTLINDSVDQLSQAIKELRRLDKRTIIDDRFLWQISNVETWVSTALTDASYCVQSFPGQRMSKRTATIKVKAQNVAEVTSIALALFHRYASRYQAAARATKVP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1759 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 205 IPR035513 -
Apr4g1759 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 205 IPR006501 GO:0004857
Apr4g1759 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 209 - -
Apr4g1759 219 CDD PMEI-like_3 45 207 - -
Apr4g1759 219 SMART PMEI_2 38 201 IPR006501 GO:0004857
Apr4g1759 219 Coils Coil 117 140 - -
Apr4g1759 219 PANTHER BNAANNG18590D PROTEIN 9 209 - -
Apr4g1759 219 Pfam Plant invertase/pectin methylesterase inhibitor 42 201 IPR006501 GO:0004857
Apr4g1759 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 205 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1759 Apr-Chr4 23279375 23280034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1759 43 202 Carbohydrate Esterase AT3G49220 27.329 9.30e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1759 - - ccaj:109789012 293.123