Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1757 ATGGCCATCAAAGACTCTCTTGACCCAGAAAACCGTGTGTTGATCTCATGGACACCCCATTCTGACCCATGTAGCAGTGTCTCTTTTGAGGGTGTGGCTTGCAATGAGCATGGTCTTGTTGCCAATATTTCACTGCAAGGAAAGGGTCTATCTGGAAGGATACCTGCAGCCTTGGCTGGTCTCAAGAGCTTAACTGCTCTCTACCTTCACTTCAACGCCCTTAGTGGAATATTACCAACGGAGATTGCCAGTTTGACTGAGCTGAGTGATTTGTATCTCAATGTCAATAATCTCTCTGGTCATATCCCTCCTCAGATTGCCAATATGTCAAATCTTCAAGTTTTGCAGCTTTGTTATAACAAGTTTACTGGGAGTATACCTACTGAACTTGGAAGGTTAAGGAAGCTCAGTGTTCTTGCACTGCAATATAATCAGTTATGTAGCGCAATTCCTGCAAGTTTGGGTGAACTGAAGACATTAGCGCGACTGGATCTGAGCTTCAATGGCCTTTTCGGTCCTATTCCAGTGACATTGGCTAACGCACCTAAATTGGAGAGTTTAGATATTCGAAACAATTCTCTCTCGGGTAGTGTCCCTACAGCACTAAAAAGACTGAAAGGAGGGTTCCAGTATATCAACAACCCTGGTTTATGTGGTGTTGGATTTGCTAATTTAGATTTTTGTAAAGCAGTAAGCAGTTCCGAACCAGTTAAACCTGAACCGTATGAACCTAGTAATGTTCTTCCTGCATCAGTTGAACCACAAGCGCAAAATTGCAGCAATGCTCATTGTAAAAAGACATCAGAATCTTTAAAAATTGGTTTGGCTTTTGGGGTGATTGGAGTTATTGTTTCTTCGACTATTTCGGGACTCCTTTTTGTCTTGTGGTACCGTCGTTGGAAACAGAAAACTGAAAGCACCGCTGACACTTCTGAAAACCAGCTTAGTCCTTATCAGATCAAACAAGCATGCAGGAAAAGTGCATATCCCCTTATAAGTGTGGAGTATTCCAATGGATGGGATCCATTAGGCAAAGGTAGAAGTTGTTACTCTCAGGAGATTCTCGAGAGCTTTATGTTCAATCTTGAAGAAGTGGAGAGCGCAACTCATTGCTTCTCAGACCAAAATTTGATGGGGAAAAGTAAATTTGCTGCTGTCTACAGGGGAATTTTGAGAGATGGATCGGTAGTGATTATAAAGTGCATTGCCAAGACAAGCTGCAAGTCTGATGAAACTGAATTCGTTAAAGGTTTGAAGATATTGACCTCATTAAAGCATGAAAATCTAGTTCGTTTGAGAGGCTTTTGCTGTTCTAAAGGTCGGGGACAATGTTTTCTTATTTATGATTTTGTCTCAAATGGGAATTTGTTACGGTATCTTGATGTTAAGAAAGGCAATGCTAAGGTACTTGAATGGTCTACCAGAGTATCCATCATCCATGATATTGCCAAAGGCATTGGTTATCTGCATGGGAAGAAAGGAAGCAAAAATACTCTAGTTCACCAGAACATATCAGTTGAAAATATTCTTCTCGATGCTCGGTATAATGCTTTACTTGCAGATTCAGGACTGCACAAACTGCTTGCAGATGATGTTGTGTTTTCTACCCTCAAAGCCAGTGCAGCCAGGGGATATCTGGCTCCTGAATACGGGACAACTGGTCGTTTGACCGAAAAGAGTGATGTGTATGCTTTCGGAATGATAGTTTTCCAGCTTCTTACTGGAAAACGTGATATCACTCAATTTAGTCGCCAACGGGTTGAAAGTGCTAGTTTTAAAGATATAGTGGATGATAATCTTGAAGGGATGTTCTCAGAATCAGAGGCAACCAAACTGGGAAGAGTTGCTTTGCTTTGCACCCATGAATCTCTGCATCTCCGACCTTCTATGGATGATATAATGCTACAACTGGGTGATATACAGTAG 1926 0.4154 MAIKDSLDPENRVLISWTPHSDPCSSVSFEGVACNEHGLVANISLQGKGLSGRIPAALAGLKSLTALYLHFNALSGILPTEIASLTELSDLYLNVNNLSGHIPPQIANMSNLQVLQLCYNKFTGSIPTELGRLRKLSVLALQYNQLCSAIPASLGELKTLARLDLSFNGLFGPIPVTLANAPKLESLDIRNNSLSGSVPTALKRLKGGFQYINNPGLCGVGFANLDFCKAVSSSEPVKPEPYEPSNVLPASVEPQAQNCSNAHCKKTSESLKIGLAFGVIGVIVSSTISGLLFVLWYRRWKQKTESTADTSENQLSPYQIKQACRKSAYPLISVEYSNGWDPLGKGRSCYSQEILESFMFNLEEVESATHCFSDQNLMGKSKFAAVYRGILRDGSVVIIKCIAKTSCKSDETEFVKGLKILTSLKHENLVRLRGFCCSKGRGQCFLIYDFVSNGNLLRYLDVKKGNAKVLEWSTRVSIIHDIAKGIGYLHGKKGSKNTLVHQNISVENILLDARYNALLADSGLHKLLADDVVFSTLKASAARGYLAPEYGTTGRLTEKSDVYAFGMIVFQLLTGKRDITQFSRQRVESASFKDIVDDNLEGMFSESEATKLGRVALLCTHESLHLRPSMDDIMLQLGDIQ* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1757 641 SMART LRR_typ_2 85 109 IPR003591 -
Apr4g1757 641 SMART LRR_typ_2 61 84 IPR003591 -
Apr4g1757 641 SMART LRR_typ_2 133 157 IPR003591 -
Apr4g1757 641 SMART serkin_6 372 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1757 641 Gene3D Phosphorylase Kinase; domain 1 346 450 - -
Apr4g1757 641 Gene3D Ribonuclease Inhibitor 149 214 IPR032675 -
Apr4g1757 641 Gene3D Transferase(Phosphotransferase) domain 1 451 641 - -
Apr4g1757 641 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515
Apr4g1757 641 ProSiteProfiles Protein kinase domain profile. 372 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1757 641 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Apr4g1757 641 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 1 640 - -
Apr4g1757 641 SUPERFAMILY Protein kinase-like (PK-like) 349 637 IPR011009 -
Apr4g1757 641 SUPERFAMILY L domain-like 22 205 - -
Apr4g1757 641 Pfam Protein tyrosine and serine/threonine kinase 376 636 IPR001245 GO:0004672|GO:0006468
Apr4g1757 641 CDD STKc_IRAK 378 633 - -
Apr4g1757 641 Pfam Leucine rich repeat N-terminal domain 2 35 IPR013210 -
Apr4g1757 641 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1757 Apr-Chr4 23158992 23161928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1757 1 485 Miscellaneous Gene Families AT4G22730 51.491 2.83e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Apr4g1757 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1757 - - var:108327466 952.97