Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1738 ATGGCAGGGAGTTATTGGTACAATGAAGTGGTTCCATTCACAGCTATGATTGCAATAGAGTGCACAAACGTTGGTGTTAACGTTTTATTCAAAGCAGCAACTGAAAAGGGGCTCAGTTACTATGCCTTCATCTTTTACTCCTTTGCAATCTCAACCCTCTTTCTCCTCCTGCCTCTGCCCTTCGTCTTCCGATGGTCAAGAGGGCTTCCTCCGTGGAATATGTCTCTGATCATCAGATTTTTCCTCCTTGGAGTTATTGGACTTGCAGCTCAGCTTTGTGGATACAGAGGACTCAAATACACTTCGCCTACTCTTGCTTCTGCTCTTAGCAACCTTATCCCGGCTTTTACCTTCATCTTAGCGATCCTTTTCAGGATGGAGAAGGTAGCTTTGAGAAGCTCAAGCACTCGTGCCAAAATCTTGGGTTCTATGGTATCGATATCAGGTGCACTGGTAGTTGTTCTCTATAAGGGCCCCACAATCTTATCCAATTCATCTCCACAACCATCACCTACCGTTGATTTTCCAATGGGCTCAACATCACAATCAAATTGGGTTCTTGGTGGGTCCCTACTCCTCATTGAGTATCTTTTGCTTCCAATCTGGTACATTGTTCAGACCAGTGTGATGAAAAAATACCCAGCAGAGTTTATCGCGGTGTTCATGTACAACCTGAGCGGGACTCTCATATCTGCACCAGTTTGCTTACTATTAGAATCAAATTTGAGCACTTGGAAGATAAATCCTGATATAACCTTGATCACTGTTATATACTCGGGTTTCTTTTGCACAGGTCTAAGTTGTTTGGTTCACACTTGGGGCCTCCATCTTAAAGGCCCAGTATATGTATCAATCTTTAAGCCTCTGTCAATAGTCATTGCTGCCGCTATGAGTTTTATATTTCTTGGCGAAGCACTGCATTTTGGAACTGTTGTTGGAGCACTCATACTATCATGTGGGTTTTATGCTGTTATCTGGGGAAAGGCAAAAGAAGAAGAATTGAGTGAGGAGTTAGACATACGTCCCAGGACCAGCGGTGATAGTCCTTTGTTGAAGAACTTCAGCGAGAACGCGTAA 1077 0.4355 MAGSYWYNEVVPFTAMIAIECTNVGVNVLFKAATEKGLSYYAFIFYSFAISTLFLLLPLPFVFRWSRGLPPWNMSLIIRFFLLGVIGLAAQLCGYRGLKYTSPTLASALSNLIPAFTFILAILFRMEKVALRSSSTRAKILGSMVSISGALVVVLYKGPTILSNSSPQPSPTVDFPMGSTSQSNWVLGGSLLLIEYLLLPIWYIVQTSVMKKYPAEFIAVFMYNLSGTLISAPVCLLLESNLSTWKINPDITLITVIYSGFFCTGLSCLVHTWGLHLKGPVYVSIFKPLSIVIAAAMSFIFLGEALHFGTVVGALILSCGFYAVIWGKAKEEELSEELDIRPRTSGDSPLLKNFSENA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1738 358 PANTHER WAT1-RELATED PROTEIN 10 334 - -
Apr4g1738 358 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016021|GO:0022857
Apr4g1738 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Apr4g1738 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 330 - -
Apr4g1738 358 Pfam EamA-like transporter family 193 325 IPR000620 GO:0016020|GO:0016021
Apr4g1738 358 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1738 Apr-Chr4 22227861 22237680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1738 1 351 Nodulin-like Gene Family AT5G40240 56.374 2.97e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1738 - - gmx:100805667 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1738 4 22227861 22237680 Apr4g1738 4 22227861 22237680 ECH
Apr4g1738 4 22227861 22237680 Apr6g0112 6 1095382 1098882 ECH
Apr7g1615 7 23287899 23290915 Apr4g1738 4 22227861 22237680 ECH