Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1728 ATGTACAAGATTCGGGGATTCAAGCTGAGGAAGCGCCTGATCCGGATCTCCAGATGGGTCACAAGGAAGATCCAGATCCGAAACCGACTTCGGTACCATCGGCTGGGTGGTCGTCCTCAATCGCCGGCGAAAAGGCCCATCACGAAGCTCCTCACGTGGGGTCGGAAGCTGAAGGCAAGTGCCAAGTCCTTCCTGACAGTGAGAGGTGGGTCGGGTTATGCCCATATGGGATCCGAGCCGGACCAAGGTGTACCCAAAGGGTTCTTAGCCGTGTATGTAGGGCAGAAGAACGGTGAGTTACACCGCGTTCTGGTGCCGGTAATATACTTCAACCACCCTTTGTTTGGGGAATTGCTGAAGGAAGCAGAGGAGGAGTTCGGGTTCAACCACCCTGGAGGAATCACCATTCCGTGCCGGTTCACCGAGTTTGAACGGGTCAAGACCCGAATCGCATCCGGATCCTGTAGAAGCCAACGTCGATGA 483 0.5528 MYKIRGFKLRKRLIRISRWVTRKIQIRNRLRYHRLGGRPQSPAKRPITKLLTWGRKLKASAKSFLTVRGGSGYAHMGSEPDQGVPKGFLAVYVGQKNGELHRVLVPVIYFNHPLFGELLKEAEEEFGFNHPGGITIPCRFTEFERVKTRIASGSCRSQRR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1728 160 Pfam Auxin responsive protein 68 147 IPR003676 GO:0009733
Apr4g1728 160 PANTHER SMALL AUXIN-UP RNA-RELATED 1 157 - -
Apr4g1728 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 157 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1728 Apr-Chr4 22038413 22039659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1728 3 143 Calmodulin-binding Proteins AT3G43120 34.507 4.06e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1728 K14488 - gmx:100783436 228.794