Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1727 ATGGAAAGAAATTATTTATGGGTAGTCTTCACTACATCCCTTTTCCTCCTAAACATGAGTTATTGTGTGGAGGATGAGGTGAAGGGAACTTTGGTACAGTTTCTGGCACTACTCTCCAGCAGTGATGGCCAGCAAAACTCCACTTTGGTTTGGAAACAAGACTCTGATCCGTGCAAGGACCTCTGGCAAGGTGTATATTGTGATGCTCAAAACATGTCTATAAAGAGGTTGTTACTTGACAGGTTCAATTTGTCTGGAACTCTTGACGTTGCTATGCTTTGCAACTTGCAGCCTCTAGCTGCATCTCTCACTTTCCTTAGTCTTGATGGCAACCAAATTAGTGGAGAGATAGCAGCAGGGATTGGAAACTGCAAACAACTCACTCGGTTACACTTAAGAGGGAACAAACTTACTGGGGAGCTTCCTACTTCACTCACCATGTTGAATAATTTGAAAAGACTAGACATTTCGAGCAATGAGTTTTCGGGACCTTTGCCAGACTTGTCCACAATCTCAGGACTGAACATGTTCCTAGCACAAAACAATCATCTCGGTGGAAACATACCCGCATTTGATTTCTCCAATTTTGATCAATTTAATGTCTCTTTTAACAATTTCAGCGGCTCCATTCCAAATGTGCATGGCTATTTCTTTGCTGATAGCTTCCTCGGTAATCCTGAACTCTGTGGAGATCCACTACCAAAAAAGTGTTCTGCTCTACCCATGCCTCTCTCCCAGGCTCAGGCATCAGAAGAATCAAAAGGTCCTTCAAAAGAGCAGATTCTTATGTACTCAGGCTATGCTGTATTGGGTTTTGTTATTATCCTTATTGTATTCATAAAACTGTGTAGAAGAAAGAAAAGAGATCATAAAATTGAAGCATTGAATGGGGTAGTGGCAAGTGATGGTGGTGTTGAAAAGACTAGCAATGTTTCCAGCGAATACAAAGCTGAGGTAAGCAGATCTGAGTTTTCAGTCACTTCCGAGAGTGGGATGGTTTCACAATCACTTATAGTTCTTTCAAGGCCAACGGCTAATGAATTGAAATTGGAGGACTTGTTGAGGGCCCCTGCAGAGTTGATTGGTAGAGGAAAGAATGGAAGTCTTTATAAGGTGATGGTTGAAAAGGGGGTGATGGTGGTTGTAAAAAGGATCAAGGATTGGAGTATTTCAAGCCATGAATTCAAGCAAAGAATGCACATACTGACTCAAGTGAAGCACCCTCATGTACTGTCACCTCTTGCTTTCTATTGTTCCAAACAAGAGAAGCTTTTGGTCTATGAATATCAGCACAATGGAAGTTTATTTAAGCTTCTACATGGTACTCCAAAAACCTTGGACTGGACCAGCAGACTTGGGATTGCAGCTACAATTGCTGAGGCATTAGCTTTCATGCATCAAGAGCAAGGCCAACATGGTATAGGTCACGGTAATATGAAATCCTCCAACATTTTGCTAAACAAGAACATGGAGCCATGTATAAGTGAATATGGTGTAATGGGTATTGATGATCAACAAATTTCACCTTTTTCCAGTCCTATTGTTGCTGGTGCGTTTGATGCCTTAAAGGGAGATGTTTATGGCTTTGGTGTTATTCTTCTTGAATTGCTTACTGGAAAACTGGTGAAGAGCAATGGGATTGATTTGACTGATTGGGTCCAGTCCGTTGTAAAGGAAGAATGGACGGGTGAAGTCTTTGACAAGTTCCTAATATCTGAGTATGCAAGTGAAGAGAGGATGGTCAATTTGCTTCAGGTGGCTATAAGATGTGTCAATGGTTCCCCAGAGGCAAGGCCAAGCATGAATCAAGTTGCTCTCATGATTAACACAATAAAAGAAGATGAAGAAAAATCCTTGATGTATGAACTATGA 1872 0.4124 MERNYLWVVFTTSLFLLNMSYCVEDEVKGTLVQFLALLSSSDGQQNSTLVWKQDSDPCKDLWQGVYCDAQNMSIKRLLLDRFNLSGTLDVAMLCNLQPLAASLTFLSLDGNQISGEIAAGIGNCKQLTRLHLRGNKLTGELPTSLTMLNNLKRLDISSNEFSGPLPDLSTISGLNMFLAQNNHLGGNIPAFDFSNFDQFNVSFNNFSGSIPNVHGYFFADSFLGNPELCGDPLPKKCSALPMPLSQAQASEESKGPSKEQILMYSGYAVLGFVIILIVFIKLCRRKKRDHKIEALNGVVASDGGVEKTSNVSSEYKAEVSRSEFSVTSESGMVSQSLIVLSRPTANELKLEDLLRAPAELIGRGKNGSLYKVMVEKGVMVVVKRIKDWSISSHEFKQRMHILTQVKHPHVLSPLAFYCSKQEKLLVYEYQHNGSLFKLLHGTPKTLDWTSRLGIAATIAEALAFMHQEQGQHGIGHGNMKSSNILLNKNMEPCISEYGVMGIDDQQISPFSSPIVAGAFDALKGDVYGFGVILLELLTGKLVKSNGIDLTDWVQSVVKEEWTGEVFDKFLISEYASEERMVNLLQVAIRCVNGSPEARPSMNQVALMINTIKEDEEKSLMYEL* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1727 623 Gene3D Ribonuclease Inhibitor 21 237 IPR032675 -
Apr4g1727 623 Pfam Protein kinase domain 359 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1727 623 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Apr4g1727 623 PANTHER OS10G0387400 PROTEIN 7 622 - -
Apr4g1727 623 Gene3D Transferase(Phosphotransferase) domain 1 431 622 - -
Apr4g1727 623 SUPERFAMILY Protein kinase-like (PK-like) 358 607 IPR011009 -
Apr4g1727 623 SUPERFAMILY L domain-like 48 215 - -
Apr4g1727 623 ProSiteProfiles Protein kinase domain profile. 355 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1727 623 PANTHER OS05G0588300 PROTEIN 7 622 - -
Apr4g1727 623 Gene3D Phosphorylase Kinase; domain 1 323 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1727 Apr-Chr4 21991485 21993862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1727 30 612 Receptor kinase-like Gene Family AT1G68400 34.591 1.11e-92 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr4g1727 Pkinase 4.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1727 - - gmx:100813796 980.319