Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1707 ATGTTCGTAGGTGGTTCCTTCCCACTAACTTCGAAGAGGAGAAGGGTCACCAACGTTTATTCCACCGACATGGATACTGAAACTGCTAAGGCCAAGCTTGCAGCTGTTAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGCCCTTTCTTCTACGTCAAATGCTGCATTATCTAATGGAGAGGAGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATTACAGACTTTTGGCTGCTAAAAAGGAAGATAAATTCTTGAAAACTCGAAAAATCCGAGAAGCAGAAGAGGTGGCTCGTAGGTCAAGCATAACCAAAGCTGTAATTAGAGTTCGCTTCCCCGATAATCACACATTGGAGGGTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATCTCCTTTCTAAAGTGATTGCACAGCCAGAGCAGCCATTTTATATATATACTACTCCACCTAAGAAAGTGATCCATGACTTGTCTCAGGATTTTTATAATGCTGGCTTTTGTCCTGGGGCCATTGTGTACTTCTCATATAATGTCCCAAAAGGTGATGGCACTGTGGTTGACCAAAATGGTCCTTACCTACAAGAAGAGATCTTATCTCTGAAGGATTTGAATGTTGCTGATGATCAAGGCCAGCAATCGGAGGCTGAGCCTGTGCAGTCAGCACCAGAGCCCGTTGAGGCCACGCGACCACCACCTGTTGAAGAACGCAAACCTGCTGAGAAAAAGATTGTTAAACCAAAGTGGCTAAAAATGTGA 777 0.4324 MFVGGSFPLTSKRRRVTNVYSTDMDTETAKAKLAAVKERFGREIHVFETSALSSTSNAALSNGEETDDFYEFTAEDYYRLLAAKKEDKFLKTRKIREAEEVARRSSITKAVIRVRFPDNHTLEGTFHPSETVQSLIDLLSKVIAQPEQPFYIYTTPPKKVIHDLSQDFYNAGFCPGAIVYFSYNVPKGDGTVVDQNGPYLQEEILSLKDLNVADDQGQQSEAEPVQSAPEPVEATRPPPVEERKPAEKKIVKPKWLKM* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1707 258 CDD UBX2_UBXN9 110 183 - -
Apr4g1707 258 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Apr4g1707 258 MobiDBLite consensus disorder prediction 212 258 - -
Apr4g1707 258 Pfam UBX domain 108 173 IPR001012 GO:0005515
Apr4g1707 258 Gene3D - 41 180 - -
Apr4g1707 258 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 10 258 IPR044232 GO:0032984|GO:0051117
Apr4g1707 258 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Apr4g1707 258 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 10 258 - -
Apr4g1707 258 MobiDBLite consensus disorder prediction 236 258 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1707 22 138 C2H2 Transcription Factor Family AT2G01650 31.405 2.23e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1707 K15627 - gmx:100818386 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1707 4 20758924 20770545 Apr4g1707 4 20758924 20770545 ECH