Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1662 ATGCCATCTCACTTATGTGTTATGGTTGAAACATTGATATTGATTGTTCTAGCACAAACAGTTGTGGGAGTGAATTCACTTTCAGAAGCTGATAAGATAGGCACTTTGCCTGGGCAGCCACAAGTCAAATTCCAGCAATATGCTGGTTACATTACAGTAGATGAGAAGCAGAAGAGAGCTTTATTTTACTACTTTGTTGAAGCAGAAGTACAACCAGCTTCTAAGCCACTTGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCCTCTGTTGGGGCTGGAGCTTTTGTTGAGCACGGCCCTTTCAAACCAAGTGAAAATGGTCTTGTGAAGAATGACTATAGTTGGAACAAAGAGGCAAATATGCTGTACGTGGAATCTCCGGCTGGTGTCGGTTTCTCCTACTCTGCCAATAAATCTTTCTATGACCTTGTGAACGATGAAATAACAGCAAGGGATAATCTTGTTTTCTTACAGCATTGGTTCACTAAATTCCCAGAGTACAAAAACAATGACTTCTTTATTACAGGGGAGAGTTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAGACAAAATTCAATTTAAAGGGAATAGCGATAGGGAATCCTCTTCTGGAATTTAACACTGATTTCAACTCCAGAGCTGAGTTTTTCTGGTCTCACGGACTAATATCAGATTCAACCTACGAAATCTTCACTAAAGTATGCAACTATTCCCAAATTAGGAGACAGCATCAAAGTGGGAAACTTACCCCGGTTTGTGCGGGAGTAAATAAACTAGTGTCATCAGAGGTTAGCAGATACATTGATACATATGATGTTACTCTTGATGTCTGTCTATCATCAGCAGATCAACAGGCTTATGTTCTGAATAAATTAACTCAACTGGGAGCGAAGATAGATGTTTGTGTGGAAGATGAAACTATCACATACTTGAATAGGAAAGACGTGCAGGAAGCTCTCCATGCTAAGCTCGTAGGGATCACCACATGGTCAACCTGCAGCGATGTTCTCAATTATGACATGCAGAATCTAGAGATTCCTACCATTTCTATTATAGGGGCAATTGCTAAGACAGGTATCAGGGTTCTGGTATACAGTGGAGATCAGGATTCAGTCATCCCACTACTTGGGACACGATCCCTTGTAAATGGAATAGCCAAGGAATTTGGATTGAATACTACCGTGTCCTATAGAGCTTGGTTTGAGGGAAGACAGGTGGCTGGGTGGACACAATTATATGGAGACATGTTATCATTTGCCACTATAAGAGGAGCAGCTCACGAGGCTCCGTTTTCACAACCAGAGAGATCATTAGTGCTGCTAAAAGCATTTTTGGAAGGAAAGCCTCTTCCGGAACCATTCTCTTAA 1386 0.4141 MPSHLCVMVETLILIVLAQTVVGVNSLSEADKIGTLPGQPQVKFQQYAGYITVDEKQKRALFYYFVEAEVQPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLVKNDYSWNKEANMLYVESPAGVGFSYSANKSFYDLVNDEITARDNLVFLQHWFTKFPEYKNNDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQSGKLTPVCAGVNKLVSSEVSRYIDTYDVTLDVCLSSADQQAYVLNKLTQLGAKIDVCVEDETITYLNRKDVQEALHAKLVGITTWSTCSDVLNYDMQNLEIPTISIIGAIAKTGIRVLVYSGDQDSVIPLLGTRSLVNGIAKEFGLNTTVSYRAWFEGRQVAGWTQLYGDMLSFATIRGAAHEAPFSQPERSLVLLKAFLEGKPLPEPFS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1662 461 Gene3D - 308 344 - -
Apr4g1662 461 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Apr4g1662 461 Gene3D - 355 453 - -
Apr4g1662 461 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Apr4g1662 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 PANTHER CARBOXYPEPTIDASE 13 459 - -
Apr4g1662 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 459 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 Pfam Serine carboxypeptidase 37 453 IPR001563 GO:0004185|GO:0006508
Apr4g1662 461 SUPERFAMILY alpha/beta-Hydrolases 35 457 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1662 Apr-Chr4 19734541 19738337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1662 316 456 Calmodulin-binding Proteins AT2G22960 28.369 9.59e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1662 K16297 - gmx:100805028 851.277