Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1616 ATGCTTGAAGGTGATGATTTGAAAGAGAGGATAATAAGTGGAGAGGAGGTTGGATTTTGGATGGTTGAAGGTGGTATGCTTTGGAAGAGAGATAAAAGAGAAAGAATGGTGGAGGAAGGAGATTTCATGGTGGTGGGTAGCCAAACTCCAATAAAGATACGTCTCATATTGGTTAGGGCGTCAAAATCATCTAGCCAATTAGTGGAGAACTTCTATAGTTCATCTTGTCCTAATGTAGAATCCATCGTCACCCAAGCAGTGACCACCAAGTTCACCGAGACCCTCACCACTGGACAAGCAACCCTGCGTCTATTTTTCCATGATTGCTTTGTTGAGGGATGTGATGCCTCAGTGATGATCTCCTCGCCAAATGGGGACGCAGAGAAGGATGCCTCGGAAAATGGTTCCCTCGCAGGAGATGGGTTTGACACTGTGATAAGGGCAAAGGAAGCAGTGGAAGCTACATGCCCTGGAGTGGTCTCATGCGCAGACATTTTGGCGCTTGCTACCAGAGACGTTATAGGCTTGCTTGGAGGTCCTGAGTACGACGTAGAGGTGGGACGCAGAGACGGAATGATATCGGAGGCATCAAGCGTGGAAGCAAACATTCCAAAAGCGAGTTTCAACCTTAACCAACTCAACGCAATATTCTCAAAAAAGGGTCTTAGCCAAATGGACATGATAGCACTCTCTGGAGCACACACAGTGGGGTTCTCACACTGCGACCAGTTTGCAAATCGCTTATACTCCTCTCCCGTGGACCCCACTTTGAACCCCAGCTACGCCCAACAGTTGATCACTGCATGCCCCCGAAACCCTGACCCCAGCGTAGTGCTTGCTCTCGACCCCCAAACCCCTTCTTCGTTTGACAATTTGTTTTTCAAAAACTTGGTCTCCGGTGAGGGCTTGTTGACTTCCGACCAGGTTCTCTTCTCCGACCCTAAATCCCAGCCTACGGTGCTTCAGTTTGCCAACAACCCTGCCGATTTCAGCGCCGCCTTTGTCACGGCCATGAGGAATCTCGGAAGGGTGGGGGTTAAGACTGGCACCCAGGGAGAGATTAGGAGAGATTGCACCAAATTCAATTCTCGGTGA 1095 0.4941 MLEGDDLKERIISGEEVGFWMVEGGMLWKRDKRERMVEEGDFMVVGSQTPIKIRLILVRASKSSSQLVENFYSSSCPNVESIVTQAVTTKFTETLTTGQATLRLFFHDCFVEGCDASVMISSPNGDAEKDASENGSLAGDGFDTVIRAKEAVEATCPGVVSCADILALATRDVIGLLGGPEYDVEVGRRDGMISEASSVEANIPKASFNLNQLNAIFSKKGLSQMDMIALSGAHTVGFSHCDQFANRLYSSPVDPTLNPSYAQQLITACPRNPDPSVVLALDPQTPSSFDNLFFKNLVSGEGLLTSDQVLFSDPKSQPTVLQFANNPADFSAAFVTAMRNLGRVGVKTGTQGEIRRDCTKFNSR* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1616 364 PRINTS Haem peroxidase superfamily signature 98 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Haem peroxidase superfamily signature 160 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Haem peroxidase superfamily signature 178 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Haem peroxidase superfamily signature 226 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Haem peroxidase superfamily signature 282 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 Pfam Peroxidase 84 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 ProSitePatterns Peroxidases active site signature. 98 109 IPR019794 GO:0004601
Apr4g1616 364 PRINTS Plant peroxidase signature 76 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 100 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 140 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 159 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 178 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 225 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 280 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 296 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PRINTS Plant peroxidase signature 336 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PANTHER - 53 363 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 PANTHER PEROXIDASE 55 53 363 - -
Apr4g1616 364 ProSitePatterns Peroxidases proximal heme-ligand signature. 226 236 IPR019793 -
Apr4g1616 364 Gene3D Peroxidase, domain 2 204 341 - -
Apr4g1616 364 SUPERFAMILY Heme-dependent peroxidases 66 362 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 ProSiteProfiles Plant heme peroxidase family profile. 66 362 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1616 364 Gene3D - 70 362 - -
Apr4g1616 364 CDD secretory_peroxidase 66 361 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1616 Apr-Chr4 18504253 18515622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1616 55 362 Peroxidase AT5G14130 61.859 9.22e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1616 K00430 - gmx:100791275 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1616 4 18504253 18515622 Apr4g1616 4 18504253 18515622 ECH