Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1615 ATGCATGGTGATACAAATTGTGTTAAAGAGGAAGAGTCCCTGACAGCTCATCCTATTCGTCCACAGTTAACACCCTTCCAATTTTGTCGCTCTCTCTTTCTCTCTCTCTTTTCTACCTTTGCTTTATCTATTTCTCTTGCACAATATCAGGTGCCTCTCCTCGACCGATCGAAAAACACACACAGAGACAGGGGTAGCAATTGCAATTGCAATCAAACACTCATGATGGGTCAGTTACAGGAGAAGCTTTTGTCTTTGTACAAGAGTAGATGGCTTGTGTTTGTGGCAGCAATGTGGTTGCAATCATGGGCAGGTATTGGGTACCTGTTTGGGAGCATATCACCTGTCATAAAGAGTTCCCTTAACTATAACCAGAAGCAACTTGCTGTGTTGGGTGTTGCCAAGGACCTTGGTGACTGTGTTGGCTTCCTCACTGGCGTGTTATGTGAGATTTTGCCTATCTGGGGCGCTCTCCTTGTTGGTGCTTCTTTGAACCTTGTTGGCTATGGTTGGGTCTGGTTGGTTGTTACTTATCGAGTTCCAACTCTCCCTTTATGGGCTATGTGTATTCTTATATTTGTGGGAACAAATGGTGAGACCTACTTCAACACAGTTTCTCTAGTGTCCTGTGTGCAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGATTTGCTGGGTTGAGTGGTGCAATATTGACACAAATATATGCATTGCTCCATTCCCCTGATCATGCATCATTACTATTTATGGTTGCTGTTGGTCCGGCATTGGTTGCAATAGGTCTTATGTTCCTTGTTAGACCTGTTGGGGGCCACAAACAAGTCAGGCCATCAGATGGCAAATGCTTCACATTTGTCTATGGTGTGTGCCTCCTATTGGCTGCTTATTTGTTTGGAGTCATGGTTGTCCAAGATCTAATTGAAGTGAATGAAACTGTCGTCACTATATTCACAGGGATTCTCTTGTTGATCCTAATTGTCCCAATTATTATTCCCATTTCGTTGACTTTTGATCCAGAGCATAAGCATGCCGAGGAAGAGGTACTTCTTCCAGGAACACAGAATAAAGAACCAGGGAAATCTCATCTTGATAGTGATGAAGTAATATTAAGTGAAGTGGAAGATGAGAAGCCTAAGGAAGTGGATTTGCTTCCTGCATCGGAGAGGCAGAAACGTATAGCACATTTGCAATCAAGACTGCTCCAAGCAGCTGCAGAAGGCGCAGTGAGGGTAAAGAGGAGGAGAGGACCACATAGAGGGGAAGATTTTACCTTGACACAAGCGTTGATTAAAGCGGATTTTTGGCTCCTTTTCATTTCCATGGTCTTGGGTTCTGGATCTGGGTTGACTGTAATTGATAATCTTGGTCAGATGAGCCAATCTCTAGGTTATGACAATGCACATATATTTGTTTCAATGATCAGTATTTGGAACTTTCTTGGCCGTGTTGGAGGGGGTTACATATCTGAGCTTGTTGTAAGGGATCATGTGTATCCAAGACCAACTGCATTGGCTGTATTTCAACTTGTTATGACTATTGGGCATCTTTTCATTGGTATGGGATGGCCAGGGTCAATGTATGTTGGCACTTTACTCGTTGGACTTGGTTACGGGGCTCACTGGGCAATTGTTCCAGCTACTGCTTCTGAGTTGTTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATCACTCTGGCAAACCCTGTGGGAACTCTAGTCTTCTCTAGTCTCATTGCCAGCACAATCTATGATTCTGAAGCTGAGAAACAAGCTCACAATGGTCGTCACCATCCCCTGAATATAGGATCAATGATGTTGCGTTTGCAGGATGTTAATGAGTCTCTAAAGTGTGAGGGTAGCATATGCTTTTTCTTAACTTCAATTATCATGGCAGGTTTCTGCATTGTTGCAGCTGGCCTATGCATGGTTCTGGTATTCAGAACTAGGATTGTTTATGCCAACCTATATGGAAAATCTTCTACTAGTAGGCTTCGATAA 2013 0.4327 MHGDTNCVKEEESLTAHPIRPQLTPFQFCRSLFLSLFSTFALSISLAQYQVPLLDRSKNTHRDRGSNCNCNQTLMMGQLQEKLLSLYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLAVLGVAKDLGDCVGFLTGVLCEILPIWGALLVGASLNLVGYGWVWLVVTYRVPTLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALLHSPDHASLLFMVAVGPALVAIGLMFLVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLFGVMVVQDLIEVNETVVTIFTGILLLILIVPIIIPISLTFDPEHKHAEEEVLLPGTQNKEPGKSHLDSDEVILSEVEDEKPKEVDLLPASERQKRIAHLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISELVVRDHVYPRPTALAVFQLVMTIGHLFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASTIYDSEAEKQAHNGRHHPLNIGSMMLRLQDVNESLKCEGSICFFLTSIIMAGFCIVAAGLCMVLVFRTRIVYANLYGKSSTSRLR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1615 670 Pfam Nodulin-like 90 337 IPR010658 -
Apr4g1615 670 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 79 666 - -
Apr4g1615 670 Gene3D MFS general substrate transporter like domains 387 610 IPR036259 -
Apr4g1615 670 Gene3D MFS general substrate transporter like domains 54 272 IPR036259 -
Apr4g1615 670 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 79 666 - -
Apr4g1615 670 CDD MFS_Mch1p_like 89 643 - -
Apr4g1615 670 SUPERFAMILY MFS general substrate transporter 79 276 IPR036259 -
Apr4g1615 670 SUPERFAMILY MFS general substrate transporter 287 654 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1615 Apr-Chr4 18489308 18493560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1615 75 666 Nodulin-like Gene Family AT5G14120 69.412 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1615 - - aprc:113861924 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1615 4 18489308 18493560 Apr4g1615 4 18489308 18493560 ECH