Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1602 ATGGAGAATTATTCCATGTTGTTCCCCTGTCCAAATTCTTCTAGCTACCCGGCTTCAGCAAGTGTTCTAGGAAGCTCTCAGCATGGTTTTAGTGGTCAAAGCTCTAACAACGCATTTCTGGGTTTGAGGCCTACAAATGAAAGTAGTGATCATCTTGATGAGAAGTTGGTGAACAAAGGAGAAGGTGGTAGAGATGGTTTAATGTCTCAGTTCAGTGGGAGCATTAATGTGAGTGATGAGTTAGGTGGTTCAGGGAACAATAAAAAGAAAGGGGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTTCAAACAAGGAGCCAAGTTGATATACTTGATGATGGGTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAGAACAACAAATTCCCAAGGAGCTATTACCGGTGCACGCATCAAGGATGCAATGTGAAAAAGCAAGTCCAACGCTTAACCAAAGATGAAGGGGTAGTGGTGACCACTTATGAGGGAGTGCACACCCACCCAATTGAGAAGACAACAGACAACTTTGAGCACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 573 0.4241 MENYSMLFPCPNSSSYPASASVLGSSQHGFSGQSSNNAFLGLRPTNESSDHLDEKLVNKGEGGRDGLMSQFSGSINVSDELGGSGNNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1602 190 Pfam WRKY DNA -binding domain 112 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1602 190 SMART WRKY_cls 111 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1602 190 ProSiteProfiles WRKY domain profile. 106 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1602 190 Gene3D WRKY domain 96 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g1602 190 SUPERFAMILY WRKY DNA-binding domain 103 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g1602 190 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 77 186 - -
Apr4g1602 190 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 186 IPR044810 GO:0003700
Apr4g1602 190 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1602 Apr-Chr4 18265474 18268165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1602 99 190 WRKY Transcription Factor Family AT5G13080 88.043 7.58e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g1602 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1602 - - pvu:PHAVU_001G088200g 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1602 4 18265474 18268165 Apr4g1602 4 18265474 18268165 ECH