Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1599 ATGGCTACCTCTTTAAACCCACCGCTTGGCTTGCGCTTCCTCAAACTCAAACCACCATCGTTTCCCCTCGCCCCCATTCGTCATTGCAGAGATGTTAGCTATCAACCCCCAGGGACTCAGCTCAGACTTCTGAATTCAGTTAGTTTTTCACTTCCCGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGCAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAACAAACCAACCTCTGGATCTATTTACATCCAAAAATATGGGAATGATGGACATCTTTGTCAATCGCCAGAGCCATTGGTGCCTGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAAGTCACTTTTGGGTGGCCAAGGCAAAAGGGTAATCACCAACAGAGGGAGAGCCTTGCTCTAGGGCTACAGAGGGCAATTAACTGGGTTGGATTAAGTGGGATATCGCTAGATAAAAATCCTCACTCTCTCAGTGGGGGTTACAAACGTCGTCTTGCCTTAGCAATACAATTAGTGCAAATCCCTGATCTATTGATATTGGATGAACCTCTTGCTGGACTGGATTGGAAAGCACGTGCAGATGTTGTGAAGCTTCTAAAGCACCTGAAAAAGGAATTAACTGTGCTTGTTGTTAGCCACGATTTGAGAGAGTTAGCAAGTCTAGTTGATCGATCATGGAGAATGGAAATGGGTGGCAACCTTAGACAGGAATTTCTACCATTATAA 765 0.4431 MATSLNPPLGLRFLKLKPPSFPLAPIRHCRDVSYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGINKPTSGSIYIQKYGNDGHLCQSPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNHQQRESLALGLQRAINWVGLSGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLRELASLVDRSWRMEMGGNLRQEFLPL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1599 254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 245 IPR027417 -
Apr4g1599 254 CDD ABC_cobalt_CbiO_domain1 30 244 IPR015856 GO:0005524|GO:0016020|GO:0055085
Apr4g1599 254 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 29 250 - -
Apr4g1599 254 Pfam ABC transporter 44 197 IPR003439 GO:0005524
Apr4g1599 254 PANTHER HEAVY METAL TRANSPORTER 29 250 - -
Apr4g1599 254 SMART AAA_5 53 245 IPR003593 -
Apr4g1599 254 Gene3D - 23 251 IPR027417 -
Apr4g1599 254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 252 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1599 Apr-Chr4 18205025 18227011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1599 31 231 Calmodulin-binding Proteins AT2G36910 25.822 2.19e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1599 - - vun:114196181 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1599 4 18205025 18227011 Apr4g1599 4 18205025 18227011 ECH