Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1597 ATGCCCACTCGTTGTGAAATATGTTGTGAGATCATGATAGCGATTTTCCTCCCTCCATTGGGAGTTTGCTTCCGCCATGGATGCTGCAGTGTTGAGTTCATCGTCTGCTTGCTCCTGACTATACTGGGATATATTCCAGGAATAATTTATGCTCTCTATGCTATTGTCTTTGCTGATCGTGATCAATATTTTGATGAATATAGGCGTCCCCTATATGCTGCATAA 225 0.4222 MPTRCEICCEIMIAIFLPPLGVCFRHGCCSVEFIVCLLLTILGYIPGIIYALYAIVFADRDQYFDEYRRPLYAA* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1597 74 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Apr4g1597 74 PANTHER BNAA03G50460D PROTEIN 1 74 - -
Apr4g1597 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 74 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1597 Apr-Chr4 18170019 18171011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1597 1 74 RCI2 Gene Family AT4G28088 75.676 1.79e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1597 - - gmx:100306426 154.066