Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1596 ATGGATCCCAAGGGCTCAAAGCAGGCACAGGCACAGGGACAGGAGGTAGTACCCAGCTTCCTGAGCCTCCCACAGCAACAAGGGAACAACAGCAACAACAACAATAACATGGGAGAGAACAAGCCTGCAGAGGTTAAGGATTTCCAGATAGTGATCGCTGAGAAGGAAGAGAACAAGAAGCAGCTGGCACCAAAGAGGAGTTCCAACAAGGACAGGCACACAAAGGTTGAAGGGAGGGGGAGGAGGATAAGGATGCCAGCTCTATGTGCAGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGGGAAACAATCCAGTGGCTTCTTCAACAGGCTGAGCCATCCATAATAGCAGCCACTGGGACTGGGACAATTCCAGCATCTGCTTTGGCTGCTGCTGGCACCACTGTTTCACAACAAGGAACCTCTCTTTCTGCTGGTTTGCACCAAAAGATTGATGAATTGGGAGGGTCCAATATAGGGTCAGGGAGTAGTAGGACCAGTTGGCAAATGGTTGGAGGGAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCCCCCCATGTCAGTGGATTTGGATTTCAGACATCATCTGGTCCATCTAATGCCAGTTTAGCCACTGATAGTTCAAATTACCTGCAAAAAATTGGCTTCCCTGGCTTTGACTTGCCTTCTGCCACCAACATGGGCCCTATGAGTTTTACCTCTATTTTGGGCGGTGGGGGTAACCAGCAGATGCCTGGCTTGGAACTGGGCTTGTCTCAGGATGGCCATATTGGGGTCTTGAATCCTCAAGCTTTGAGCCAGATTTATCAGCAGATGGGTCAAGCTAGTAGAGTACACCAGCAGCAGCAACAGCACCATCAGCAAACTCCTCCTAAGGATGATTCTCAAGGCTCAGGACAGTAG 924 0.5011 MDPKGSKQAQAQGQEVVPSFLSLPQQQGNNSNNNNNMGENKPAEVKDFQIVIAEKEENKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGTTVSQQGTSLSAGLHQKIDELGGSNIGSGSSRTSWQMVGGNLGRPHVATGLWPPHVSGFGFQTSSGPSNASLATDSSNYLQKIGFPGFDLPSATNMGPMSFTSILGGGGNQQMPGLELGLSQDGHIGVLNPQALSQIYQQMGQASRVHQQQQQHHQQTPPKDDSQGSGQ* 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1596 307 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 27 306 - -
Apr4g1596 307 MobiDBLite consensus disorder prediction 48 79 - -
Apr4g1596 307 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 306 IPR005333 GO:0003700
Apr4g1596 307 MobiDBLite consensus disorder prediction 1 79 - -
Apr4g1596 307 MobiDBLite consensus disorder prediction 278 307 - -
Apr4g1596 307 Pfam TCP family transcription factor 68 157 IPR017887 -
Apr4g1596 307 ProSiteProfiles TCP domain profile. 69 123 IPR017887 -
Apr4g1596 307 MobiDBLite consensus disorder prediction 7 40 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr4g1596 Apr-Chr4 18017782 18021407 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1596 1 307 TCP Transcription Factor Family AT3G27010 54.790 8.25e-86 258
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr4g1596 TCP 1.6e-30 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1596 - - vun:114191990 492.656
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1596 4 18017782 18021407 Apr4g1596 4 18017782 18021407 ECH