Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1589 ATGATCAATTCACTGTGTGGAAGCTCAGTGTCCCTCAAGAGTGAGAACTCAAGAACCAAACTCCAACCCACTTCCTCAAACGATTCAGTTTTGCAGTCTAAGAAAAATGCCACTCAATCTTCTCTTGATTTAGAGCAAACTAGTCTAACCCCACCAAGCTTAAACCTTCCTTCACTCAAATTTGACTTAGATGGAGATGTGGAAGTTCAATCACCAGATAGTTCAATGTGGGAATCATTTTTTGCCGATCAATTAGATGCGGATTTCATGATCTCTTCCCCAGTGAGGAACGTTCCTTCCCCACAAGCCTCTACCTACAACTGCAACTACAATTATGCTCAAGGAATGCAAGGTCAAAGCCTATCAGGGTGTTCCCCACCTCGTTTTTCATCATCCCAAATTGGAGCCTTCAACAGTGGCCACAAAGGGAAGGGACTAAGCCCACTCCACAGGGTGTTTAACTCTCCAAACAATCAATTTATGCAGCATGTTGAAAACCTTTCACTGCCAGCAATAGAAGAGTTCTTGGAGGATTATCAAGGAGATGGGTGTGGTTATTCATCAACCAAGGTGTCTTCTGATATTGGAAGTTCATTTGACATGTCAACGCAGATTCCATCCATATTGGATAGCTTAACAATGCCCAATTCCTCAAGGTATTGTGGATCAGTTAGTGAGGACTCCTCAGTGCATGGTGGTGGTGGTGGTTCATCTCAACTGTCCCAAGAAAGTGACATGTATCATCATCAGATGGGGTCTATGGCTAGTGCATCACTGTCCCAAGCTCTACAACAAGAACGCTACCATGAGAAAAAGCAAAAGCAGCAACAGCAAGAGACTTTGATGCTGCCTATTCCAATAGGAATCGAGCAGGAGCAAGACAGCGGGCTTCAACTGGTGCACCTGTTGCTAGCATGTGCAGAGGCAGTGGCGAAAGAAGAATACATGTTAGCTAGAAGGTACCTACATCACCTCAACAGAGTGGTAACACCTTTGGGAGACTCAATGCAACGCGTGGCAGCATGCTTCACAGAATCCCTAACGGCAAGACTTACCACAACAAAACCCCAACAATCACAACCATCACCATCACCATCACCATCACCCTCAAACTCCCTGGAAGTCCTCAAAATCTACCAAATCGTATACCAAGCTTGCCCCTACATCAAATTCGCCCACTTCACCGCAAACCAAGCCATCTTTGAAGCCTTCGAAGGCGAAGAACGCGTCCACGTCATCGACCTCGACATCCTCCAAGGTTACCAATGGCCAGCCTTCATGCAAGCCCTCGCCGCACGCCCCGCCGGAGCTCCGTTCCTCCGAATCACCGGCGTCGGTCCTTCCGCCGATGCCGTCAGAGAAACCGGCCGTTGTTTAACGGAGTTAGCCCACTCCCTCCGCATCCCCTTCGAATTTCACGCCGTTGGCGAACAGTTACAAGACCTCAAGCCCCACATGTTCAACCGAAGAGTCGGCGAGGCTCTCGCCGTTAACGCTGTTAACCGCCTGCACCGTGTCCCTAATAACCACCTCGGAAACTTACTCACGATGATAAGAGACCAAGCACCCAACATTGTAACGCTGGTTGAGCAAGAAGCGAGCCATAATGGGCCTTATTTTCTAGGAAGGTTTTTGGAAGCGTTGCATTATTATTCAGCCATTTTTGATTCGTTGGATGCGACTTTTCCTCCTGATTCGGCGCAGCGTGCGAAGGTGGAACAGTATATATTTGCCCCTGAGATAAGGAACATTGTTGCGTGTGAGGGAATTGACAGGATTGAGAGGCATGAGAGGTTGGAGAAATGGAGAAAGGTGATGGAAGGGAAAGGCTTTAAGGGTGTGGCTCTTAGTCCTAATGCGGTTACTCAGTCGAAGATTTTGTTGGGTTTGTATTCGTGTGATGGGTATAGATTGACAGAGGATAAAGGGTGCTTGTTGCTTGGGTGGCAAGATAGGGCCATTGTAGCTGCGTCTGCATGGCGGTGCTGA 1989 0.4791 MINSLCGSSVSLKSENSRTKLQPTSSNDSVLQSKKNATQSSLDLEQTSLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFADQLDADFMISSPVRNVPSPQASTYNCNYNYAQGMQGQSLSGCSPPRFSSSQIGAFNSGHKGKGLSPLHRVFNSPNNQFMQHVENLSLPAIEEFLEDYQGDGCGYSSTKVSSDIGSSFDMSTQIPSILDSLTMPNSSRYCGSVSEDSSVHGGGGGSSQLSQESDMYHHQMGSMASASLSQALQQERYHEKKQKQQQQETLMLPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTESLTARLTTTKPQQSQPSPSPSPSPSNSLEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEGEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGPSADAVRETGRCLTELAHSLRIPFEFHAVGEQLQDLKPHMFNRRVGEALAVNAVNRLHRVPNNHLGNLLTMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGIDRIERHERLEKWRKVMEGKGFKGVALSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIVAASAWRC* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1589 662 Pfam GRAS domain family 299 661 IPR005202 -
Apr4g1589 662 MobiDBLite consensus disorder prediction 352 371 - -
Apr4g1589 662 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 660 IPR005202 -
Apr4g1589 662 MobiDBLite consensus disorder prediction 258 277 - -
Apr4g1589 662 MobiDBLite consensus disorder prediction 220 242 - -
Apr4g1589 662 ProSiteProfiles GRAS family profile. 290 661 IPR005202 -
Apr4g1589 662 MobiDBLite consensus disorder prediction 1 55 - -
Apr4g1589 662 PANTHER GRAS FAMILY PROTEIN RAM1 34 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1589 Apr-Chr4 17863542 17866309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1589 293 662 GRAS Transcription Factor Family AT1G66350 45.333 3.89e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr4g1589 GRAS 1.8e-133 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1589 - - gmx:100805039 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1589 4 17863542 17866309 Apr4g1589 4 17863542 17866309 ECH