Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1584 ATGGACAAGAACCTTGCCGAAAATTCCGGCAGTTTCGTTCACAGAGACGAACCAAAGAATGCCGGTGACACGCCGCATTCTCCGCCAAAAGCGGATCCCAAACCTGACGGCGACACCGCCAAAGCGGAACCCCCGGCTCCGACGGTGCATCATGGAGGAAACAGGGAGGAGAAAGAAGAGGCTGTGGAGTGTCCTCTCCCGAGCCTCGAGAAGGTTTCAGAAGACATTGACCAATTGCTCGTGACTTTGCAGTGGAACCACGACGATGATAAAGATAGCAACAAAGGAAATGCAGAGAGGAACATTGAGATCCCTGGTTTCGTGGAGAGGTACTTGGATCTGGTGGAGGAGAAGATAGTGAAATATGACACAGGAGAAGGCAAAGCCAAATGGGTAGAAGTTGTGGAGGAAGATTCGTGGTTGCTGGAAACCGTGCATCGGATTTCCAAGTTGATGAATTTGCTGACTCATCATAACGAACCGAAAGAAGGAAACAATGGTCAAAGAGACTCGCTGGTGAACCGTATTGGCTCCATTCAACAGCGTGCGATGTCGTATTTGGAGGAGGACTTCCGTCTGTTAATGGAAGAATCTAGAAACCCAACAGAATTAGATCCCGGCGGAAACAATCAGAATAACAACAACGACTCCAAAGGGAAACAAGTAGCATCAGAACAACAAGACGTGCAGGATCACGATCATCAACAACCAGAATCCGAAACCACTTTCCCGGGTTACCCGGAGGAGGCCATCGCCAGCCTGAGAAAAATCGCCGCCGAGATGTTATCCGGCGGCTACGAATCGGAGTGCTGCCAGGTCTACATTATATCCAGAAGGAACGCGTTCGAAGAGATCCTCCAGAAGCTAGGATTGGAGAGGATCAGCATCGATGAAATGGTCCAGAAGGTGCAATGGGAGACCCTGGCCAGAGACATGATCCCCGCCTGGATCAACACGTTCAAGCAATGCGCCGCCGTATACTTCCCCGGCGAGCGGAGGCTGGCGGAGACCGTGTTCGCTGATAACCCCTCGGTAGCCGCAGGGCTCTACAGCAGCCTCTCCCGCGGCGTTGTCATTCAGCTTCTCAACTTCGCTGAGGGCGGAGCTATGACAAAGCGCGCCGGAGAGAAGCTTTTCAAGCTCCTGGACATGTACGAGACCCTCAGGGACGTGATCCCGAAGCTCGACGGGCTATTCCCAGAAGAATCAGTGGAGGAGCTGAAGACGGAAATGAACCTGGCCAAGTTACGACTTGGGGAGGCCGCCATCTCCATCTTCTGCGACCTAGAGAACTCAATTAAATCCGAGACAGCTAAAACTGCGGTCCCAGGCGGAGCAGTGCACCCGCTCACACGCTACATTATGAACTACCTCAACATAGCAGGGGACTATAAAGAAACATTGGAGCAAGTTTTTAAGGAGTACTCAAAGATCGAGCGCGCCGACTCAACGAGCAATGCGCGGCACGAAAACGGCGGCGTTTGGGATAAGGGAGCATCTTCGCCGTTCACGGCACAGGTGATGAGGGTGATGGAGTTGCTGGACGCGAGCCTAGATGGAAAGGCTCGGTTATACAGGGACGTGTCGCTGAGCAATTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAGGGGTCGCACGAGATGAGCCAAGTGATGGGTGACACGTGGTGCAGGAAGAAGTCTTCTGAGTTAAGAACTTACCATAAGAACTATCAGAGGGAAACTTGGAACAGGGTGCTGGCGTGTCTGAACCAAGAAGGGTTGAACGTGAATGGGAAGGTGTATAAGCCTGCGCTGAAGGAGAGGTTCAAGAGCTTCAATGCAATGTTCGATGAGATTCACAGGACGCAGAGCACGTGGGTGGTGAAGGACGAACAGCTTCAATCGGAGCTTAGGGTTTCCGTTTCGTCAGTGGTGATTCCGGCTTACAGGTCCTTCATTGGTAGGTTCTCGCAGTATTTGGACCCCGGAAGACAGACAGAGAAGTATATAAAATACCAAGCAGAAGACATAGAGACTTATATTGATGAGTTGTTTGACGGGAAGCCTCACCAGTCCATTGCTAGAAGGAAAACATAA 2091 0.5132 MDKNLAENSGSFVHRDEPKNAGDTPHSPPKADPKPDGDTAKAEPPAPTVHHGGNREEKEEAVECPLPSLEKVSEDIDQLLVTLQWNHDDDKDSNKGNAERNIEIPGFVERYLDLVEEKIVKYDTGEGKAKWVEVVEEDSWLLETVHRISKLMNLLTHHNEPKEGNNGQRDSLVNRIGSIQQRAMSYLEEDFRLLMEESRNPTELDPGGNNQNNNNDSKGKQVASEQQDVQDHDHQQPESETTFPGYPEEAIASLRKIAAEMLSGGYESECCQVYIISRRNAFEEILQKLGLERISIDEMVQKVQWETLARDMIPAWINTFKQCAAVYFPGERRLAETVFADNPSVAAGLYSSLSRGVVIQLLNFAEGGAMTKRAGEKLFKLLDMYETLRDVIPKLDGLFPEESVEELKTEMNLAKLRLGEAAISIFCDLENSIKSETAKTAVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKEYSKIERADSTSNARHENGGVWDKGASSPFTAQVMRVMELLDASLDGKARLYRDVSLSNFFMMNNGRYILQKIKGSHEMSQVMGDTWCRKKSSELRTYHKNYQRETWNRVLACLNQEGLNVNGKVYKPALKERFKSFNAMFDEIHRTQSTWVVKDEQLQSELRVSVSSVVIPAYRSFIGRFSQYLDPGRQTEKYIKYQAEDIETYIDELFDGKPHQSIARRKT* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1584 696 MobiDBLite consensus disorder prediction 199 246 - -
Apr4g1584 696 MobiDBLite consensus disorder prediction 203 224 - -
Apr4g1584 696 MobiDBLite consensus disorder prediction 50 65 - -
Apr4g1584 696 Pfam Exo70 exocyst complex subunit 315 681 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr4g1584 696 SUPERFAMILY Cullin repeat-like 142 684 IPR016159 -
Apr4g1584 696 MobiDBLite consensus disorder prediction 9 39 - -
Apr4g1584 696 Gene3D Exocyst complex component Exo70 132 693 - -
Apr4g1584 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 64 693 IPR004140 GO:0000145|GO:0006887
Apr4g1584 696 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 64 693 - -
Apr4g1584 696 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1584 Apr-Chr4 17703059 17705149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1584 68 696 EXO70 exocyst subunit family AT5G13990 53.198 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1584 K07195 - gmx:100820172 981.859