Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1580 ATGGGTCGATGCCCTTGTTTTGGGTTGAGGAGGAAGGGCAAAGGGAAGAACCTCAAGACTCAGGAGGAAGAAAACAAGGTTGCGAAGAATGATGAACCTGAAGAGAATGTCCCTCAAAAATCTTCAGGAGTTAGACCAGAAGAAAATCAAACAGAAGAGAGTATTCCCTCTAATAAGGCTCACATATTTACCTTCCGAGAGCTTGCAACGGCAACAAAAAATTTTAGGGATGAAACCTTTATTGGGCAAGGTGGGTTTGGCACTGTTTACAAAGGAAAGTTAGAGAAAACAAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACTGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCTCTTCTACGCCATGCCAACCTTGTTAACATGATTGGTTACTGTGCTGAAGGGGATCAACGTCTTCTTGTGTATGAATACATGCCTTTGGGATCCTTAGAATCTCATCTCCATGATATTTCATCTGATAAAGAACCTCTTGATTGGAATACCAGAATGATGATAGCTGGTGGAGCAGCAAATGGACTAAACTATTTGCACCATGAAGCAAAGCCTTCTGTTATATACAGGGATCTAAAATCTTCCAACATACTATTGGATGAAGATTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGTCCAACTGGAGACCAATCATATGTTGCCACTAGGGTTATGGGAACACAAGGTTACTGTGCCCCAGAATATGCCACTAGTGGAAAATTAACAATGAGATCAGACATTTACAGTTTCGGGGTTGTGTTATTGGAGTTAATTACTGGACGTAGAGCATATGATGATACTCGTGGCCCAGACAAGCATCTCGTTGACTGGGCACGCCCAGTGTTTAGGGACAAAAGGAGTTTTCCAAGATTGGCAGATCCACGGTTGAAAGGTCAGTTCCCAGGATCTGGTCTAAGGATGGCCGTTGAATTAGCAGCCATGTGTCTTCGAGAAGAGCCACGTCACCGGCCTGATGCGGGTGATATAGTGCTAGCTATAGAGTACTTGTCATCCAAGCAATATGCCCCAAAAGTATCCAACGTAGTTAACACAGGAGGGATAGAGAGTGACGAGTCCTCAAAAGAGACATCAGTGATTTTGCCTAAAGACTCACAAAGAGAGCGAGCTGTTGCTGAGGCCAAGCTGTGGGGAGAGACGTGGAGACAGAAAAGACAAAGTTGTCAAAGTAGTCCTGAGGAAGCAAATAGGTAG 1257 0.4344 MGRCPCFGLRRKGKGKNLKTQEEENKVAKNDEPEENVPQKSSGVRPEENQTEESIPSNKAHIFTFRELATATKNFRDETFIGQGGFGTVYKGKLEKTNQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHANLVNMIGYCAEGDQRLLVYEYMPLGSLESHLHDISSDKEPLDWNTRMMIAGGAANGLNYLHHEAKPSVIYRDLKSSNILLDEDFHPKLSDFGLAKFGPTGDQSYVATRVMGTQGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRRAYDDTRGPDKHLVDWARPVFRDKRSFPRLADPRLKGQFPGSGLRMAVELAAMCLREEPRHRPDAGDIVLAIEYLSSKQYAPKVSNVVNTGGIESDESSKETSVILPKDSQRERAVAEAKLWGETWRQKRQSCQSSPEEANR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1580 418 ProSiteProfiles Protein kinase domain profile. 75 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1580 418 PANTHER OS07G0668900 PROTEIN 16 376 - -
Apr4g1580 418 MobiDBLite consensus disorder prediction 42 56 - -
Apr4g1580 418 MobiDBLite consensus disorder prediction 368 387 - -
Apr4g1580 418 PANTHER OS07G0668900 PROTEIN 16 376 - -
Apr4g1580 418 MobiDBLite consensus disorder prediction 15 38 - -
Apr4g1580 418 Gene3D Transferase(Phosphotransferase) domain 1 152 369 - -
Apr4g1580 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Apr4g1580 418 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Apr4g1580 418 MobiDBLite consensus disorder prediction 1 56 - -
Apr4g1580 418 Pfam Protein kinase domain 76 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1580 418 Gene3D Phosphorylase Kinase; domain 1 37 151 - -
Apr4g1580 418 CDD STKc_IRAK 81 345 - -
Apr4g1580 418 SMART serkin_6 75 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1580 418 SUPERFAMILY Protein kinase-like (PK-like) 52 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1580 Apr-Chr4 17643361 17647874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1580 49 412 Glycoside Hydrolase AT3G07070 59.079 4.07e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr4g1580 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1580 K13430 - gmx:100809298 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1580 4 17643361 17647874 Apr4g1580 4 17643361 17647874 ECH