Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1573 ATGGCAGACCACCCTGCGGCTATCTACGAGTTCCTGAAGCAGCCCTCAAAAGGTTCGGTTGCAAAGAGAGCACAACCACACCCACCACCACCCTCATCCTCCACCCGAACCTTCCAATGCCACTTTTGCCACCGCATGTTCTACACTTCACAAGCCCTCGGTGGGCACCAAAATGCTCACAAGCTTGAAAGAGCCGCAGCAAGAAGAACCAACGTCCCTTTTCACCACAACAACATTAACAACACCGTGCCACTGCCACCACCTTCGCCTGTGTCTTTGGAGCCTTCTCTTAAGATCACTGAGCCCAAGCCCAAGCTCAAGGCCATTCCGGAACTCGAAGCCCCATCTCCTCATGGGCTTTTCTTCCACCACCACCACCCTTACTGGCTCGATGTGGAACCTCTACATTTTCAGAATCACCACGTTGCAAGCACCGCCACTCTCTCTCTTCCCTTCCATGCCGCCTCATCCACTTCCACCCCTCAACACAATGCTTCTGTTGATGCTTCTGAACATGTCAACCTCGACCTCACCCTTCGCCTTTAA 546 0.533 MADHPAAIYEFLKQPSKGSVAKRAQPHPPPPSSSTRTFQCHFCHRMFYTSQALGGHQNAHKLERAAARRTNVPFHHNNINNTVPLPPPSPVSLEPSLKITEPKPKLKAIPELEAPSPHGLFFHHHHPYWLDVEPLHFQNHHVASTATLSLPFHAASSTSTPQHNASVDASEHVNLDLTLRL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1573 181 MobiDBLite consensus disorder prediction 13 36 - -
Apr4g1573 181 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Apr4g1573 181 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Apr4g1573 181 Gene3D Classic Zinc Finger 19 82 - -
Apr4g1573 181 PANTHER ZINC FINGER PROTEIN JAGGED 27 181 IPR045320 GO:0003700
Apr4g1573 181 PANTHER ZINC FINGER PROTEIN KNUCKLES 27 181 - -
Apr4g1573 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1573 Apr-Chr4 17335274 17335819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1573 36 92 C2H2 Transcription Factor Family AT5G57520 52.632 4.54e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1573 - - vra:106758350 171.014