Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1558 ATGGCACTCCCCGACTCTTCTCGCCGCAACTCTCTCATCCCTACCTTCCTCTACTCTTCCTCTCCCAAAACCCTACCGCTTCACCGCATGCTCAGTTCCCCCGCTGCCTCCGCCGCCGTCGACTCTCCGTCGTCGCCGTCCGTCGGATCGCGTGGGAGCGGCATCATGATTCGCTCTCCCAGCGAGTCTCGCAAGATCGAGATGTACTCGCCTGCCTTCTACGCCGCCTGCACCGCCGGTGGAATCCTTAGCTGTGGTCTCACTCACATGGCCGTCACTCCTCTTGACTTGGTCAAGTGTAATATGCAGATTGATCCTGCCAAGTACAAGAGCATCTCGTCTGGTTTTGGTGTTTTGCTTAAGGAGCAGGGATTCAGGGGCTTTTTCCGCGGCTGGGTGCCTACCTTGATTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAATTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAAGCAAGTACAAGACCTTGATATACCTTGCTGGTTCAGCGTCTGCGGAGGTCATTGCTGATGTTGCACTTTGCCCATTTGAGGCCGTGAAGGTCCGTGTACAAACCCAACCTGGTTTTGCAAGGGGTATGGCTGATGGGTTCCCAAAATTTGTCAAATCTGAAGGAGCTGCAGGGTTGTACAAGGGATTAGTGCCTCTCTGGGGACGACAAATTCCATACACAATGATGAAGTTTGCTTCTTTTGAGACCATTGTTGAGCTGATCTATAAGCATGCCATCCCTACACCAAAGAATGACTGCAGCAAAAGTCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATATTGCTGGTGTATTTTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTCTCTTTCCTGAACAATGCCAAAGGAGCTACTGTTGGTGATGCGGTGAAGAAGCTTGGTTTGTGGGGTCTCTTTACCCGTGGTCTGCCCCTCCGTATTGTTATGATTGGAACTCTTACTGGAGCCCAGTGGGGGATATATGATGCATTCAAAGTTTTTGTGGGACTGCCAACCACTGGTGGTCCTGCACCTGCAGCTCCTCCTGCTCCTGCTCCTACTGAGCTAGCAAAGGCATAG 1125 0.5084 MALPDSSRRNSLIPTFLYSSSPKTLPLHRMLSSPAASAAVDSPSSPSVGSRGSGIMIRSPSESRKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFRGWVPTLIGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGMADGFPKFVKSEGAAGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNDCSKSLQLGVSFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPPAPAPTELAKA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1558 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Apr4g1558 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 349 IPR018108 -
Apr4g1558 374 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 365 IPR044677 GO:0005315|GO:1990547
Apr4g1558 374 Gene3D Mitochondrial carrier domain 72 350 IPR023395 -
Apr4g1558 374 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 365 - -
Apr4g1558 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
Apr4g1558 374 Pfam Mitochondrial carrier protein 75 158 IPR018108 -
Apr4g1558 374 Pfam Mitochondrial carrier protein 171 257 IPR018108 -
Apr4g1558 374 SUPERFAMILY Mitochondrial carrier 75 345 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1558 Apr-Chr4 17009923 17013399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1558 6 370 Chloroplast and Mitochondria Gene Families AT5G14040 79.412 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1558 K15102 - gmx:548006 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1558 4 17009923 17013399 Apr4g1558 4 17009923 17013399 ECH
Apr4g1558 4 17009923 17013399 Apr6g1378 6 20856533 20859987 ECH
Apr4g1558 4 17009923 17013399 Apr6g1378 6 20856533 20859987 PCT