Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1530 ATGGGAAGACATGGTGCGATTGAGTTGCCAATACGAGATACCAGGCGTTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAATTTCAGTGACAAAAATTTGATTGGAGTAGGAAAATTTGGGGAAGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGTCGAGGACTTGCAACTCAGGAATTTGTTGATGAGGTACGCTATCTCTCTTCTATTCACCATCGGAATCTCGTTACTCTTTTAGGCTACTGCCAGGAAAACAATATTCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGACCTGGTCAGGAATCACAAGAGAGGCTAGAATTCAAGCAAAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACACTTTGAGTCCCCGTTTGGTGCATAAGGATTTCAAAACCGCTAATGTTCTTGTGGATGAAAACCTCATTGCTAAGGTTTCAGATGCTGGACTTAGAAATTTTCTGGGGAGAGTTGACATAGCAGGGTCATCTTCTCAAGTGGCAGCAGACGAGATATTCCTTGCACCTGAGGTGCGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATTCAGCTTTGGCGTATTCTTGCTGGAACTATTCAGTGGGAAAGAAGCAATAGAATCACCATTTCCAGACACTAACCAAAATCTGGTTGAATGGGTGCTAAGTAATCAAGACCGTGGCATTATGTCTAACATAATTGATCGGAGATTGGATAGTAGTTTTACAGCTGAAGGCATGGAAGAGTACATTATGCTTATAATAAGATGTTTAGAATCTTCAAGTGAGAGGCGACCAGCCATGAGCTATGTGGAAATGGAACTTGATCGGATCCTAGAAAAAGAAATGAACTTGACAACAATCATGGGTGAAGGAACCCCAACTGTGATTCTTGGAAGTCAGTTATTCAGAGCAACAACATGA 993 0.4149 MGRHGAIELPIRDTRRFEMEELSLATKNFSDKNLIGVGKFGEVYKGLLQDGMLVAIKKRRGLATQEFVDEVRYLSSIHHRNLVTLLGYCQENNIQFLIYEYVPNGSVSSHLYGPGQESQERLEFKQRLSIAQGAAKGLAHLHTLSPRLVHKDFKTANVLVDENLIAKVSDAGLRNFLGRVDIAGSSSQVAADEIFLAPEVREFRRFSEKSDVFSFGVFLLELFSGKEAIESPFPDTNQNLVEWVLSNQDRGIMSNIIDRRLDSSFTAEGMEEYIMLIIRCLESSSERRPAMSYVEMELDRILEKEMNLTTIMGEGTPTVILGSQLFRATT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1530 330 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Apr4g1530 330 ProSiteProfiles Protein kinase domain profile. 29 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1530 330 SUPERFAMILY Protein kinase-like (PK-like) 11 295 IPR011009 -
Apr4g1530 330 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 329 - -
Apr4g1530 330 Pfam Protein tyrosine and serine/threonine kinase 33 297 IPR001245 GO:0004672|GO:0006468
Apr4g1530 330 PIRSF ILK 10 310 - -
Apr4g1530 330 Gene3D Transferase(Phosphotransferase) domain 1 102 315 - -
Apr4g1530 330 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Apr4g1530 330 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 329 - -
Apr4g1530 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1530 Apr-Chr4 16552743 16556915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1530 15 303 Receptor kinase-like Gene Family AT1G30570 41.356 2.78e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Apr4g1530 PK_Tyr_Ser-Thr 5.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1530 - - gmx:100820178 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1530 4 16552743 16556915 Apr4g1530 4 16552743 16556915 ECH