Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1499 ATGGGAACCTCTTGCATAGAAGCTCCACCGCTTGTTCAAGACCTGAAGGTCATCATCCACAAAACTTCAATGGTTTTCCCATCCAAAGAAACTCAGAAGAAGTCCTTGTTCCTATCAAACATAGACAAGGTCCTCAATTTCGAAGTGCAAACTGTTCACTTCTTTGCAGCAAACAACGATTTTCCTCCCCAAACAGTGGCTGAGAAGTTCAAGAACGCTCTACAAGATTCTCTAGTGGTCTATGACTTCTTAGCTGGAAGATTGAGGCTGAACTCCGAAACCAATAGATTAGAGATAAATTGCAACGCAAAGGGTGCTGGGTTTGTGGTGGCTTCTAGTGAGTACACATTAAATGAGATTGGAGACTTGGGTTATCCTAATCCAGCTTTTGCGCAACTTGTTCACGAGAGTCAAGATTTCATTGAACCAGGTGATCAACCACTATGTGTTGCACAGCTTACATCCTTCAAGTGTGGTGGTTTTGCTATCGGATTCACAACCAGCCATACGACCTTTGATGGGCTTAGTTTTAGAACTTTCTTGGACAACCTTGCTGCATTGGCTTCCAACAAGCCCTTGACTGTGATACCCTGCCATGACAGGCAACTCCTGGCCGCGCGATCGCCTCCACGTGTCAGCTTCCCCCACCCTGAGTTGATCAAGCTCGATAACCTCCCCACAGGCCTTGAGAATGGGGTCTTTGAGGCTACCAAAGAAGAACTTGACTTTAAGGTTTTTGAACTAACATCTCAGAACATCATGAGCCTTAAGGAGAAAGCTAAAGGTAGCAGTGTTGGTCGTGTCACCGGGTTTAACGTTATCACTGCTCATATATGGAGATGCAAGGCATTGTCTGGACCAGATGATCCTACTAGGTCATCTACAATACTATATGCTGTGGATATTCGTTCAAAGTTTGATCCTCCGTTACCCAAATCATACACCGGAAACGCTGTGTTAACGGCGTATGCCACAGCGAAGTGTAAGGATTTGGAGAAAGGTTCATTCTCAAGCTTGGTTGAGATGGTGACAGAGGGTGCAAAGAGAATGAATGATGAGTATGCAAGGTCTATAATAGATTGGGGAGAGTTGTATAATGGTTTTCCACATGGGGAGGTTTTAGTGTCTTCATGGTGGAGATTGGGGTTTGAAGAGGTAGAGTATCCATGGGGAAAGCCAAAGTATTGCTGTCCAGTGGTGTATCACAGGAAGGATATTATACTATTGTTTCCTCCTTTCGGTGGAGGTGAAGGTGAAGGTGGTTGTGGTGGTAATGATGGGGTAAATATTATTGTGGCTCTTCCTCCTAAGGAAATGAAAAAGTTTGAGAGCCTCTTTTACTCGTTCTTGATCTGA 1356 0.4447 MGTSCIEAPPLVQDLKVIIHKTSMVFPSKETQKKSLFLSNIDKVLNFEVQTVHFFAANNDFPPQTVAEKFKNALQDSLVVYDFLAGRLRLNSETNRLEINCNAKGAGFVVASSEYTLNEIGDLGYPNPAFAQLVHESQDFIEPGDQPLCVAQLTSFKCGGFAIGFTTSHTTFDGLSFRTFLDNLAALASNKPLTVIPCHDRQLLAARSPPRVSFPHPELIKLDNLPTGLENGVFEATKEELDFKVFELTSQNIMSLKEKAKGSSVGRVTGFNVITAHIWRCKALSGPDDPTRSSTILYAVDIRSKFDPPLPKSYTGNAVLTAYATAKCKDLEKGSFSSLVEMVTEGAKRMNDEYARSIIDWGELYNGFPHGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILLFPPFGGGEGEGGCGGNDGVNIIVALPPKEMKKFESLFYSFLI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1499 451 Pfam Transferase family 16 447 - -
Apr4g1499 451 Gene3D - 11 220 IPR023213 -
Apr4g1499 451 Gene3D - 231 449 IPR023213 -
Apr4g1499 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 448 - -
Apr4g1499 451 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1499 Apr-Chr4 15839083 15842229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1499 15 447 Monolignol Biosynthesis Gene Families AT5G48930 30.176 7.77e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1499 K13065 - gmx:100780971 731.095