Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1493 ATGCTGAAGCGCTCTGGCCGCCAGGAGTCTCTCTCCGATAAGATCTATAGGTTCCGAGGGACGCTCCTCGTTGTAGCGATCCCGATTGTTCTGATCACATTCGTTCTCTACGCCATGCCGTCGAGCTCCTCCAACGAGTCGGTCGGTGATTACGCCCTCGTTAGCCGGAAAATGTCCCCGGACAGGACATCTGGGGGTTCCTTTGCCGTCATATTTGACGCCGGCAGCTCCGGCAGCCGCGTGCACGTCTTCCATTTCGATCAGAACCTAGATCTCGTTCACATTGGCAAAGACCTCGAGCTTTTCGTGCAGATTAAACCGGGTTTGAGTGCGTACGCTCAGAATCCGCAACAGGCAGCGGAATCTCTGGTTTCTCTTTTAGATAAAGCGGAGAGTGTTGTTCCTCGTGAATTGCGATCCAAGACACCCGTTCGAGTTGGGGCAACTGCGGGTTTGAGGGCTTTGGAAGGGGATGCATCTGATAGGATATTGCAAGCGGTAAGGGATTTGCTAAAGGATAGAAGCAGCCTGAAATCTGAGTCGGATGCGGTCACAGTGCTGGATGGAACACAAGAAGGTGCTTATCAATGGGTTACTATTAACTATCTATTGGGAAACTTGGGAAAAGATTTTTCGAAGACTGTGGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAAACAGATGCTGCCATGGCTCCAAAAGTACAAGATGGAGAGGACCCATATGTCAAGGAGATGTTCCTTAGGGGAAGGAAATACTACCTCTATGTTCACAGTTACTTGCACTATGGTTTACTAGCTGCTCGTGCTGAGATTTTAAAGGTTTCCGATGATGCTGAAAACCCTTGTATCTTATCTGGCTATGATGGATCTTACAAATATGGAGGAAAGTCATTTAAGGCTTCATCCTCCCCTTCTGGGTCAAGCTTAAATGAATGCAAAAGTGTAGCTTTAAAGGCTCTCAATGAGTCAACAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAACGGTGGAGGCGGGGATGGACAGAAAAACCTTTTTGTTGCTTCCTTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAACTCACCAGTTGCAATAGTTCGTCCTGCGGATTTTGAGGATGCAGCTAAGCAAGCTTGTCAGACAAAACTTGAGAATGCCAAGTCCACTTATCGACATGTTGATGATGGGAACCTTCCGTATATTTGCATGGATCTTGTATATCAGTATACGCTGCTTGTTGAAGGATTTGGCATATATCCATGGCAAGAGATTACATTGGTGAAGAAACTTAAATACGATGATGCCCTTGTTGAGGCAGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTATCATCTACTGCGTAA 1410 0.4723 MLKRSGRQESLSDKIYRFRGTLLVVAIPIVLITFVLYAMPSSSSNESVGDYALVSRKMSPDRTSGGSFAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAAESLVSLLDKAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKDRSSLKSESDAVTVLDGTQEGAYQWVTINYLLGNLGKDFSKTVGVVDLGGGSVQMAYAISETDAAMAPKVQDGEDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDAENPCILSGYDGSYKYGGKSFKASSSPSGSSLNECKSVALKALNESTTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVAIVRPADFEDAAKQACQTKLENAKSTYRHVDDGNLPYICMDLVYQYTLLVEGFGIYPWQEITLVKKLKYDDALVEAAWPLGSAIEAVSSTA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1493 469 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Apr4g1493 469 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 468 IPR000407 GO:0016787
Apr4g1493 469 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Apr4g1493 469 PANTHER APYRASE-LIKE PROTEIN 1 468 - -
Apr4g1493 469 Gene3D Exopolyphosphatase. Domain 2 188 446 - -
Apr4g1493 469 Pfam GDA1/CD39 (nucleoside phosphatase) family 67 467 IPR000407 GO:0016787
Apr4g1493 469 Gene3D - 68 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1493 Apr-Chr4 15581684 15589881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1493 6 467 Calmodulin-binding Proteins AT3G04080 69.762 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1493 K14641 - gmx:100786073 810.061