Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1491 ATGAGAAGTTCAGAAATGAAATTGCTGTGTCCAGTGACAAAGACTAAGAGCATGGGTTTCCTATCCCTCGTTACTTTTCTACTCTTCTCATTCTCAATGCCAACACTCTCTTCCTCCCAAAATGTTGGGAACATCCTACTCACTAATCGTAAGATGTTCCTCAAACAAGAACCCATTACCTCTTACGCTGTTATCTTCGATGCTGGAAGCACTGGAAGCCGCGTTCACGTGTTCCATTTTGACCAAAACTTAGATCTTCTTCGCATTGGCAACGAACTTGATCATTATAAAAAGATCACACCCGGTTTGAGTGCATACGCGGACAATCCTCAACAAGCCGCAAAATCTCTGATTCCACTTCTAGATGAAGCTGAAAGTGTTGTCCCTGAGGATATGCACCCCAAGACACCCCTTAAGCTTGGGGCAACTGCAGGATTAAGGCTTTTGGATGGGGACGCTGCTGAAAGGATTTTGCAAGCGGTTAGGGATATGTTTAAGAACAGAAGCACCTTAAATGTTCAACCTGATGCAGTTAGCGTTATAGATGGATTGCAAGAAGGTTCTTATCTGTGGGTGGCTGTCAACTATCTACTGGGAAAGTTGGGGAAAAAGTTTACAAAAACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTGCAAATGGCATATGCTGTCTCAAGGAACACAGCTAAAACTGCTCCAAAAGCACCAGAAGGAGGGGATCCCTACATGAAGAAGCTTGTACTCAAGGGAAAGAAATATGACCTTTATGTTCACAGTTACTTGCGCTATGGCAGAGAAGCAGCTCGTGCTGAGATTTTGAAGGTCACGGATGGTTCTGCTAATCCTTGCATTTTAGCTGGCTTTGATGGTATCTACACATATTCAGGAGCGAACTATAAGGCCTATGCCCCCACTTCCGGTTCCAATTTTGATGAATGCAGAGAGCTAGTTCGTCTGGCTCTCAAAGTGAATGAGCCATGTCCTCATCAGAATTGCACTTTCGGTGGGATTTGGGATGGTGGAAAGGGAAGTGGACAAAGAAATCTTTATGTTACTTCATCTTTTTATTACGTGGCTTCAGAGGTTGGTATCGCTGATCCAAAGAAACCCAATTCCAAAATTCATCCTGAAGATTTGAAGACTGGAGCTAAGAAAGCATGTGGAATAACACTCGAGGATGCCAAATCCACATACCCACTTGTTCAGGAAGCAAAACTTCCATATTTATGCATGGATCTTACATATCAGTATACGTTGCTCATAGATGGATTTGGCCTAGATCCATCGCAAGAGATTACAGTGGCGAAAGGAATAGAATATCAGGATGCTGTTGTGGAAACAGCATGGCCTCTAGGAACTGCCATAGAAGCCATTTCATCTTTGCCTAAATTTAACCGATTAATGTATTTTATTTAA 1419 0.4292 MRSSEMKLLCPVTKTKSMGFLSLVTFLLFSFSMPTLSSSQNVGNILLTNRKMFLKQEPITSYAVIFDAGSTGSRVHVFHFDQNLDLLRIGNELDHYKKITPGLSAYADNPQQAAKSLIPLLDEAESVVPEDMHPKTPLKLGATAGLRLLDGDAAERILQAVRDMFKNRSTLNVQPDAVSVIDGLQEGSYLWVAVNYLLGKLGKKFTKTVGVVDLGGGSVQMAYAVSRNTAKTAPKAPEGGDPYMKKLVLKGKKYDLYVHSYLRYGREAARAEILKVTDGSANPCILAGFDGIYTYSGANYKAYAPTSGSNFDECRELVRLALKVNEPCPHQNCTFGGIWDGGKGSGQRNLYVTSSFYYVASEVGIADPKKPNSKIHPEDLKTGAKKACGITLEDAKSTYPLVQEAKLPYLCMDLTYQYTLLIDGFGLDPSQEITVAKGIEYQDAVVETAWPLGTAIEAISSLPKFNRLMYFI* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1491 472 Pfam GDA1/CD39 (nucleoside phosphatase) family 60 463 IPR000407 GO:0016787
Apr4g1491 472 Gene3D Exopolyphosphatase. Domain 2 182 440 - -
Apr4g1491 472 CDD NBD_sugar-kinase_HSP70_actin 64 223 - -
Apr4g1491 472 Gene3D - 62 456 - -
Apr4g1491 472 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 181 196 IPR000407 GO:0016787
Apr4g1491 472 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 19 472 IPR000407 GO:0016787
Apr4g1491 472 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 19 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1491 Apr-Chr4 15535956 15540175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1491 33 461 Calmodulin-binding Proteins AT3G04080 55.349 2.67e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1491 K14641 - gmx:100781628 713.375