Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1490 ATGAGGAAGATGAGTTTCCAAGTGCTCATAACTTTTATAGTTTTGTTAGTGCCTTCACTCTCTTATTCCCAATCTTTTGGGAACATCTTACTCACTCATCGTAAGATATTCCCAAAACAAGAAGCTATTACCTCTTACGCTGTCATATTTGATGCTGGTAGCACTGGAAGCCGAGTTCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCACATTGGCAACGACCTTGAGTACTATAATAAGATCACACCCGGTTTGAGTGCATACGCGGACAATCCACAACAAGCCGCAGCATCTCTGATTCCACTCTTAGAGGAAGCTGAAGATGTAGTTCCTGAGACGCTGCACCCCAAGACACCCCTTAAGCTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAAGATACTGGAAGCGGTTAGGGAAATGTTCAAGAACAGAAGTTCCCTAAATGTCCAATCTGATGCAGTATCTATTATTGATGGAACTCAAGAAGGTTCTTATCTATGGGTGGCAGTTAATTATCTATTGGGGAAGTTGGGAAAGAAGTTTACAAAGACAATAGGAGTAATTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTCTCCAGATTCACAGCTAAAAATGCTCCCAAACCACCTCAAGGAGAGGAACCTTACACAAAGAAGATTGTACTCAAGGGAAAGAAATACGACCTCTACGTTCACAGTTATTTGCACTTCGGTAGAGAAGCTTCCCGTGCCGAGATTTTGAAAGTCACTGGCGGTTCTGCTAACCCATGCCTTTTAGCTGGATTTGATGGGACGTACACGTATTCTGGAGAGGAGTATGAGGCCTACGCTCCCACTACTGGTTCCAACTATGATGAATGCAGAGATATAATTCTGAAGGCTCTCAAAGTGGATGCGCCATGCGCTAATCCAAATTGCACTTTTGGTGGGATTTGGGATGGTGGAAAGGGAAGTGGACAGAGAACCATTTATGCAACCTCATCTTTCTATTATCTCACTTCAGAGGTTGGTATCGCGGATCCAAATAAACCAAGCTCCAAAATTCATCCAGTGGATTTAGAAAATGGAGCTAAGAAAGCTTGCGCATTAACATTTGAGGAAGCAAAGTCCACTTATCCACTTCTTGCAGAAGGGAGACTTCCATATGTATGCATGGACCTTACATACCAGTATGCATTGCTTGTTGATGGATTTGGCCTAGATCCATTGCAAGAGATTACAGTGGCAATTCAAATTGAATATCAAAATTCCTTGGTGGAAACAGCATGGCCTCTGGGCACTGCCATTGAAGCCATATCATCCTTGCCTAAATTTGAGCGATTAATGTATTTTATTTGA 1371 0.4267 MRKMSFQVLITFIVLLVPSLSYSQSFGNILLTHRKIFPKQEAITSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNDLEYYNKITPGLSAYADNPQQAAASLIPLLEEAEDVVPETLHPKTPLKLGATAGLRLLDGDASEKILEAVREMFKNRSSLNVQSDAVSIIDGTQEGSYLWVAVNYLLGKLGKKFTKTIGVIDLGGGSVQMAYAVSRFTAKNAPKPPQGEEPYTKKIVLKGKKYDLYVHSYLHFGREASRAEILKVTGGSANPCLLAGFDGTYTYSGEEYEAYAPTTGSNYDECRDIILKALKVDAPCANPNCTFGGIWDGGKGSGQRTIYATSSFYYLTSEVGIADPNKPSSKIHPVDLENGAKKACALTFEEAKSTYPLLAEGRLPYVCMDLTYQYALLVDGFGLDPLQEITVAIQIEYQNSLVETAWPLGTAIEAISSLPKFERLMYFI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1490 456 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 165 180 IPR000407 GO:0016787
Apr4g1490 456 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 6 456 - -
Apr4g1490 456 CDD NBD_sugar-kinase_HSP70_actin 48 207 - -
Apr4g1490 456 Pfam GDA1/CD39 (nucleoside phosphatase) family 44 448 IPR000407 GO:0016787
Apr4g1490 456 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 6 456 IPR000407 GO:0016787
Apr4g1490 456 Gene3D - 46 440 - -
Apr4g1490 456 Gene3D Exopolyphosphatase. Domain 2 166 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1490 Apr-Chr4 15521747 15527282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1490 45 445 Calmodulin-binding Proteins AT3G04080 54.975 8.46e-158 453