Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1474 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGAGATCTTCAGCCTGGTCCACTACCTGTTGATCAACGAGAGAATTGGGCACAACCTACTCCGAACCGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGGCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAAGTTCTTCCAGAACCTGTTGCTTTAGGGGCTCCAGAACCCATTTACAATCACGTAGAGGTAGTGGCCAATAATAATATTGTGATGGAGGGTGGAAGTGCCGATAAGGTTGCGGGACCTGAAGAAGAAACAAGCACAACCCCTGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTGTATATAAGATCGAAAGGAAATTGGGTAAGGGTGGTTTTGGCCAAGTTTATGTTGGCAGAAGGGTAAGCGGTGGCTCTGATCGAACAGGTCCTGATGCAGTTGAGGTTGCTCTCAAGTTTGAGCACAGAAACAGTAAAGGTTGCAACTATGGGCCTCCTTATGAGTGGCAGGTTTACAGCACTCTGAACGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGACAGGGAGATTTCTACATTTTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTTTGGAATTCTCTTGGCCAATCGATGTCACCAAGTATGGCTGCTTGCATTGCTGTGGAGGCAATATCAATTCTTGAGAAGCTCCACTTGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCTTCTAGATGGAAGGATGCGTCATCTGGTCAACATGTTGAATATGATCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGCGTGCATGCACATTTAGGCAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATACACATTAATATTTCTCATAAAAGGGAGATTACCATGGCAGGGTTATCAGGGTGACAATAAAAGCTTTCTTGTTTGTAAGAAAAAGATGGCCACTTCTCCGGAGTTGATGTGTTGCTTTTGTCCTGCCCCATTTAGGCAGTTCCTGGAAGCTGTTACTAATATGAGATTTGATGAGGAGCCGAATTATTCTAAGCTTATATCACTTTTTGAAAGCTTGATTGAACCATGTACTCCGTTGAGACCTATTAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATAAATCTGGAAGAAGATGAGCAACCTAAGAAGAAGGTGCGATTGGGGAGTCCTGCGACTCAGTGGATATCAGTGTATAATGCACGACGCCCCATGAAGCAGAGATATCACTATAATGTAGCAGATGCTAGGCTCCGGCAGCATGTAGACAAGGGTATCGAGGATGGGTTGTACATAAGCTGTGTAGCTTCTGCAGCAAATCTGTGGGCTCTAATAATGGATGCTGGAACAGGCTTTTCTTCACAAGTTTATGAGTTATCAGCAGCCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACACCTTATACACAGCAGTCCTACAAAGTGAGTGAATCATTTCCTTTCAAATGGATCAACAAGAAGTGGAAAGAAGGATTTCATGTTACCTCAATGACTACTGCTGGCAGTCGCTGGGGTGTTGTCATGTCCAGAAATGCTGGGTATTCCGATCAGGTCGTGGAACTTGACTTTTTGTATCCAAGTGAAGGAATCCATCGACGATGGGAGAGTGGTTACCGAATTACTTCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAAGAGACTCTGCGGACTTCGGCTTTCCCTAGCACCCATGTGAAGGAAAAATGGTCCAAGAATCTCTACATTGCCTCAATATGTTATGGGCGAACTGTTTGCTAG 2127 0.4528 MPELRSGARRSKRLGDLQPGPLPVDQRENWAQPTPNRTRRRVGGGRGRGGNATAVGKGASPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALGAPEPIYNHVEVVANNNIVMEGGSADKVAGPEEETSTTPVPERVQVGNSPVYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFRQFLEAVTNMRFDEEPNYSKLISLFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADARLRQHVDKGIEDGLYISCVASAANLWALIMDAGTGFSSQVYELSAAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATSDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1474 708 PANTHER CASEIN KINASE-RELATED 101 682 - -
Apr4g1474 708 CDD STKc_CK1 147 421 - -
Apr4g1474 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Apr4g1474 708 Pfam Protein kinase domain 147 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1474 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1474 708 Gene3D Transferase(Phosphotransferase) domain 1 117 464 - -
Apr4g1474 708 SUPERFAMILY Protein kinase-like (PK-like) 147 435 IPR011009 -
Apr4g1474 708 SMART serkin_6 147 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1474 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Apr4g1474 708 PANTHER OS01G0772600 PROTEIN 101 682 - -
Apr4g1474 708 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1474 Apr-Chr4 15219670 15226490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1474 121 307 EF-hand Containing Proteins AT5G66210 28.061 6.46e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Apr4g1474 Pkinase 9.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1474 - - gmx:100801967 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1474 4 15219670 15226490 Apr4g1474 4 15219670 15226490 ECH