Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1452 ATGAATTTCTCCAACTTGGAAGCCAATTATACCATTTTCGTAAACTCTGAAGACACGGTGCCGGTCTGTTTCAATAGGACTACGTTACACGGTTCCGCCCTTTGGTTAGAAAATTCTATAGAGAACACACTCCCAGCATTTGGTCTGCAATTTGCTATTGTTCTAGCACTCAATCGCATTCTGCTCCTTGTTTCAGCGCTATACCATGTACCTCGTATTGTTCCCAACATTCTTACTGGTTTTTTATTAGGTCCATCTGTTATGGGACGTTGGAAAGCTTTCGTGAGAAACGTATTTCCATTTGGCAACATGGTGCCATTAGAGACCATGGGAACATTGAGCCTTGTTTACTACATGTTCTTGGTGGGTCTAGAGATAGACTTCAAACCACTAACAAGGTTACGCAACAAGAAGGCCATGCTTATTGCCATTGTTGGCATAATCTTCAGTATACCAATGGGGGGTGGCTTGTACTTCATGCTTGTCACCGACATGGGGCGTAAAAATTTGTCTCATCTCACCGAAAAACACGTAAAGGGGTCATTGTTTTGGGGAATTATCCTTTCTTGCAGTTGTGAGTTTTCTGAAATGGCAAAAATCCTTTCAGACCTTAAGCTTTTGGTCACAGAAAATGGACAACTATCTCTAACAGCTTCTCTTACTAATGACTTGTTTTCATGGACACTGTGTGTTTTGGCTCTAACGGAATTCTATTACACTTCAGTACTAGCATTATTTATCACCCTTGCGGTTGTGTTGGTTTGCTTTTTCGCAATTAGTCCTCTTACTAAGTGGTTATTCAACAATGTTGGTACAGGGGACCGAGAGTTCCTTGAGTCACAAGTAATATTTTTGTTGCATGTACTGTTGGTCATTGGGCTTCTCACTGATGGGTTGGGCATGCATTCCATAGTGGGTGCTTTCTTTTTGGGTGTTGTGATCCCTCAGGGGGCACTTAACAATGCAATTCAAGATAAGGTGCTTGATTTTGTGGCTATGTTCATGATGCCTCTGTTCTTTCTGGCTGTTGGGGAGAGAATTGAGATCCAAAAATTGGCTTTGGACACGCATTGGATAACCTTGGTGATGGTTATTGTGCTGGCCTTTGTGGCAAAGATGGTGTGCACTTTCACGGTCGCTTGGTTTTACCAAATGCCTTTCATGGAAGGAGTGTCCCTTGCGTTGCTCATGAATATTAAAGGAACAATGCCATTTATCATTCTTTGCACCGGCAGAGACAGACTCGAACTGGACAACCAAACCTTCGGGGTGATGCTAATCTCATGCTGGCTAATGACAATTCCCGTGGGGCCAATCTTAGCATCCATGAGAAAAACCATCACAACAAAAAAGTGTTTAGGGAGCCAAAGAACCATGCAAGGCACACAAACACAACCAGACTCACCCCTAAGAGTCTTAGCTTGCATCCACACAAAACGCGAAGCATACGTAATCATCAACCTCTTGAAATCCTCATGTCCCTCAGTTAGGACCCCAATCCAAGTTCTTGCTCTTGAACTCAACAAAATGACCAATTGCCCCGCTTCTTCCCTCATCATAAGAGACGCTCGCAAACCCTCATTTCCCTCCAAATCCTCCAAACTCGACACTGAAGACACCCTCTCCTCCTTCGACAACCTTAACCAAGCCATCTTTGCCGACAAAATGAGAATCATTTCAGACTACAACTCCATGCACAAAGACATCTTAAACCTCGCACGTCAAAGAGGTGTAACCCTAATCTTAACCACACTTTATAAACAACCAACCTATGATGGCTTAGGAGCAGGTGTTGCGACTGCAAGAGCGGTTAATATTATTAACCGTGACCGTGCAAGTAAAGATGAGAAGAAAGTGGTGTTGGAGAATCTTGCTAAGGAAGCGCCTTGTTGTTTGGCTATACTTGTGGATAGAGGATTGAGTCATAAACGTTCCAAGGAGAAACATATAGCTATGTTTTATGTTGCTGGGGAGGATGATCGTGAAGCTCTTTCTTATGCTTGGAGGATGAGTAGAAACACTGAGGTTAAGCTAACGGTGGTGAGGCTTGTTTGGGAGAACCCTAATGATGAGTTTGATGAAACGGATAAGGAGTTTATTAAAGGGTTTGTGCAACAAACGGTGGACATGCCTAGTGTGAGGTATTTGGAAAAGGTAGTGAGGGATGAAAAGGAAACGGTGAAGCTTTTGAATAAGATAGGGAACAAAGGGTTTGATTTGTATATTGTTGGGAGAGGGCATGGGAGGAAGATGTCATTGGCACAAACGGTGGATCCTGTGCTGGAGGAGCCTGTGTTGGGGCCTCTTGGGGATGCATTGACGGATTTGAATTCTGCAGCTGAGACATCTATTTTGATTTTTCAGAGATATGCTGAAGTTTGTGATGATTCTTCTAGTGGTGAGAAACATGCAAGATCTGCATGTGCTAATGCACAAGCACAGGTTTTTGACGGCATGGTGGAGCAGCAGTTATTGTACCCTCCAATGAGGTATCCGCCCATGGTTTTGAATCAGTATGCTTGA 2523 0.4344 MNFSNLEANYTIFVNSEDTVPVCFNRTTLHGSALWLENSIENTLPAFGLQFAIVLALNRILLLVSALYHVPRIVPNILTGFLLGPSVMGRWKAFVRNVFPFGNMVPLETMGTLSLVYYMFLVGLEIDFKPLTRLRNKKAMLIAIVGIIFSIPMGGGLYFMLVTDMGRKNLSHLTEKHVKGSLFWGIILSCSCEFSEMAKILSDLKLLVTENGQLSLTASLTNDLFSWTLCVLALTEFYYTSVLALFITLAVVLVCFFAISPLTKWLFNNVGTGDREFLESQVIFLLHVLLVIGLLTDGLGMHSIVGAFFLGVVIPQGALNNAIQDKVLDFVAMFMMPLFFLAVGERIEIQKLALDTHWITLVMVIVLAFVAKMVCTFTVAWFYQMPFMEGVSLALLMNIKGTMPFIILCTGRDRLELDNQTFGVMLISCWLMTIPVGPILASMRKTITTKKCLGSQRTMQGTQTQPDSPLRVLACIHTKREAYVIINLLKSSCPSVRTPIQVLALELNKMTNCPASSLIIRDARKPSFPSKSSKLDTEDTLSSFDNLNQAIFADKMRIISDYNSMHKDILNLARQRGVTLILTTLYKQPTYDGLGAGVATARAVNIINRDRASKDEKKVVLENLAKEAPCCLAILVDRGLSHKRSKEKHIAMFYVAGEDDREALSYAWRMSRNTEVKLTVVRLVWENPNDEFDETDKEFIKGFVQQTVDMPSVRYLEKVVRDEKETVKLLNKIGNKGFDLYIVGRGHGRKMSLAQTVDPVLEEPVLGPLGDALTDLNSAAETSILIFQRYAEVCDDSSSGEKHARSACANAQAQVFDGMVEQQLLYPPMRYPPMVLNQYA* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1452 840 Pfam Sodium/hydrogen exchanger family 59 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr4g1452 840 Gene3D - 46 451 IPR038770 -
Apr4g1452 840 PANTHER CATION/H + ANTIPORTER 18 798 - -
Apr4g1452 840 PANTHER CATION/H+ EXCHANGER 3 18 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1452 Apr-Chr4 14970490 14974639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1452 16 790 Antiporter Super Family AT2G13620 33.211 2.20e-137 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1452 - - aprc:113862236 1655.96