Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1451 ATGGTCAGCGTTCAATCTTGTTACCCCATTTTCCCTTCTGAACCCACCCCCAACACAAAATTCTACTCCTTGTGCGAACAAATAAAGCTTCGCACCCACGCTTCTCTTCTTTTCGTGTACAAACCAGACCACCATCACAAAGCATCAACCTTTGTTAACACCCTCAAGCATTCTCTGAAACAAGCGTTGGTTTTGTATTACCCACTTGCGGGTAGGTTGAGTTGGATCGAAGGAGAAAGATGGGAACTTCATTGCAATGCCAAGGGAGCACAAATCATAGAAGCCAATTGCAAAGAAGTGAATTTGGATGATTTGGGTGATTTCGTGCCTACCCATTTGGTGTCACAACTCATACCCAACATTGATTATAATGTCCCCATTGAGGAGGTGCCACTTCTAGTTGCACAACTAACAAGGTTCCCTTGTGGTGGTGTCACCATTGGGGTGGCTTTGTGTCGTGCTCCAATAGATGGAACCGCAGCCATGGGATTCATGAGCACGTGGGCGAAGTTGGCTAGAGGGGAGCATTTGGAGTACCGCAGAGAAATGCCATGCCATGATCGAACTATGCTAAATTCGTATAAGTTTAATTCTGGGTTGCATGACCATTCAGAGTTCCACACTCCTCCTCTTTGGTTAGGTGCCTTGGGAAACACTGAGGTAGCGGCTGCTATAGTGAAACTCACGGAAGAACAAGTCAAGAAACTTAAAAACAGGGCACGCTATGTGGGAAATACAAACACAAAACCTTATTCAACTTTTGAGGTTATTGTGGGTTACTTGTGGAGGTCTGTGAGCAAAGCACGTTATGTGGGAAATTGTGACCAACCTACGAGGTTGTCCACTTTGGTTAATTGTAGGAACCGGTTAAGGCCACCCCTTCCAAGTGCTTATGCAGGAAATGTAGCATTTCCTACCGTGACACCAACATCTTCCTTTGGTGAACTTATGCATAGGCCTTTGAGTTATGCGGCAGGGAATGTTAGGAAAGCGCTTGAAAGAGTGAATGCGGAGTTTGTGGGGTCAGCACTTTATCACATAGAAAAGGAGAAGGACATAAACTTGTTAAGGTACAGTTGTCATTACCCTGCTCCAAGTGTGCATAAGGGAACCTCCAAAGGGAACCCAAACCTTTTTGTTGTTAGTTGGATGAATTTCTCCTTTAAGGAAGCGGATTTTGGATGGGGAAAGCCTATATATTTTGGCCCCGGGTACATGGATTCTGAAGGGAAAGCATTTGTTATGAATAATGCTAGTGGCAATGGCCTCGTTGTGGCGATTTCTTTAGAGGCGTCTCACATGGATGCTTTCAAGAAATATTTTTATGGTGATATTGAAGAGGTAATTCCCATTTGCAAACTGTGA 1365 0.4447 MVSVQSCYPIFPSEPTPNTKFYSLCEQIKLRTHASLLFVYKPDHHHKASTFVNTLKHSLKQALVLYYPLAGRLSWIEGERWELHCNAKGAQIIEANCKEVNLDDLGDFVPTHLVSQLIPNIDYNVPIEEVPLLVAQLTRFPCGGVTIGVALCRAPIDGTAAMGFMSTWAKLARGEHLEYRREMPCHDRTMLNSYKFNSGLHDHSEFHTPPLWLGALGNTEVAAAIVKLTEEQVKKLKNRARYVGNTNTKPYSTFEVIVGYLWRSVSKARYVGNCDQPTRLSTLVNCRNRLRPPLPSAYAGNVAFPTVTPTSSFGELMHRPLSYAAGNVRKALERVNAEFVGSALYHIEKEKDINLLRYSCHYPAPSVHKGTSKGNPNLFVVSWMNFSFKEADFGWGKPIYFGPGYMDSEGKAFVMNNASGNGLVVAISLEASHMDAFKKYFYGDIEEVIPICKL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1451 454 Pfam Transferase family 2 442 - -
Apr4g1451 454 Gene3D - 1 208 IPR023213 -
Apr4g1451 454 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 4 447 - -
Apr4g1451 454 Gene3D - 216 443 IPR023213 -
Apr4g1451 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1451 Apr-Chr4 14960459 14961823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1451 2 442 Monolignol Biosynthesis Gene Families AT5G48930 35.778 1.61e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1451 K13065 - gmx:100775549 693.73