Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1450 ATGGCCAGCGTTCAATCTTGTTACACAATTTTCCCTTCTGAACCCACCCCCAACACAAAATTCTACTCCTTGTGCGAACAAATAAAGCTTCGCACCCACGCTCCTCTTCTTTTTGTGTACAAACCAGACCACCATCCCAATGGATCAACCTTTGTTAACACCCTCAAGCATTCTCTGAGCCAAGCCTTGGTTTTGTATTACCCACTTGCGGGTAGGTTGAGTTGGATCGAAGGAGAAAGATGGGAACTTAATTGCAATGCCAAGGGAGCACAAATCATAGAAGCCAATTGCAAAGAAGTGAATTTGGACGATTTGGGTGATTTCGTGCCTACCCATTTGGTGTCACAACTCATACCCAACATTGATTATAATGTCCCCATTGAGGAGGTGCCACTTCTAGTTGCACAACTAACAAGGTTCCCTTGTGGTGGTGTCACCATTGGGGTGGCTTTGTGTCGCGCTTCAATAGATGGAACCGCAACCATGAGGTTCATGAGCACGTGGGCAAAGTTGGCTAGAGGGGAGCATTTGGAGTACCACAGAGAAATGCCATGCCATGATCGAACTATGCTAAATTCGCATAAGCTTAATTCTGTGTTGCATGACCATTCAGAGTTCTACACACCGCCTCTTTGGTTAGGTGCCTTGGAAAACACTGAGGTAGTGGTTGCGATAGTGAAACTCACGGAAGAACAAGTCAAGAAACTTAAAAACAAGGCACGATATGTGGGAAATACAAACACAAAACCTTATTCAACTTTTGAGGTTACTGCGGGTTACTTGTGGAGGTGTGTGAGCAAAGCACGTTATGTGGAAAATTGTGACCAACCTACGAGGGTGTCCACTTTGGTTAACTGTAGGAACCGGTTAAGGCCACCCCTTCCAAGTGCTTATGCAGGAAATGTAGCATTTCCTACCGTAACACCAACATCTTCCTTTGGTGAACTTATGCATAGGCCTTTGAGTTATGCGGCAGGAAATGTTAGGAAAGCGCTTGAAAGAGTGAATGGGGAGTATGTGGGGTCAGCACTTAATCACATAGAAAAGGAGAAGGACATAAACTTGTTAAGGTACAATTTTCATTACCCTGCTCCAAGTGTGCATAAGGGAACCTTTAAAGGGAACCCAAACCTTTTTGTGGTTAGTTGGATGAATTTCTCGTTTAAGGAAGCGGATTTTGGATGGGGAAAGCCTATGTATTTTGGCCCCGGGTACATGGATTCTGAAGGGAAAGCATTTGTTATGAATAATGCTAGTGGCAATGGCCTCGTTGTGGCGATTTCTTTAGAGGCGTCTCACATGGATGCTTTCAAGAAATATTTTTATGGTGATATTGAAGAGGTAATTCCCATTTGCAAACTGTGA 1365 0.441 MASVQSCYTIFPSEPTPNTKFYSLCEQIKLRTHAPLLFVYKPDHHPNGSTFVNTLKHSLSQALVLYYPLAGRLSWIEGERWELNCNAKGAQIIEANCKEVNLDDLGDFVPTHLVSQLIPNIDYNVPIEEVPLLVAQLTRFPCGGVTIGVALCRASIDGTATMRFMSTWAKLARGEHLEYHREMPCHDRTMLNSHKLNSVLHDHSEFYTPPLWLGALENTEVVVAIVKLTEEQVKKLKNKARYVGNTNTKPYSTFEVTAGYLWRCVSKARYVENCDQPTRVSTLVNCRNRLRPPLPSAYAGNVAFPTVTPTSSFGELMHRPLSYAAGNVRKALERVNGEYVGSALNHIEKEKDINLLRYNFHYPAPSVHKGTFKGNPNLFVVSWMNFSFKEADFGWGKPMYFGPGYMDSEGKAFVMNNASGNGLVVAISLEASHMDAFKKYFYGDIEEVIPICKL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1450 454 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 447 - -
Apr4g1450 454 Pfam Transferase family 5 442 - -
Apr4g1450 454 Gene3D - 2 209 IPR023213 -
Apr4g1450 454 Gene3D - 215 443 IPR023213 -
Apr4g1450 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1450 Apr-Chr4 14923071 14924435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1450 3 442 Monolignol Biosynthesis Gene Families AT5G48930 36.526 2.44e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1450 K13065 - gmx:100775549 701.819