Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1449 ATGGTTACTGTTCACCGGTCGCACGTTGTAATTCCCTTTGAAGACACACCATCTTCGATTTTATCACTTTCCCACTGTGATCAAATCAAGCTCCCCACCCATGGATCTCAACTTTATCTCTACGCCAACACATGCATCAACAATTCTTCCTTCAAAATCTTGATGCACACTCTTTCAACCTCTCTTAGCAAAGTACTCACTCACTACTACCCCTTTGCGGGTAGATTGAGATGGATCCAGGGTGGCCGCATGCAACTCCTTTGCAACGCCAAAGGGGCACTTCTCGTGGAAGCCTCTTGTGATCATCAACTCAAGATGGAGGATTTGGGTGATTTCGCTCCCAGCCATGTTGTGGAACAACTTGTGCCAAAAATTGACTATGATGTCCCAATCGAAGAAATACCCTTGTTGGCGGCGCAGCTAACAAGGTTCCCATGTGGTTCCCTCATACTGGGACTGGCCATGTGTCGTGCTCTAGTTGATGGGGCTTCTGTTTCTGGTTTCGTTAAATCGTGGGCCAAACTCGCTAGAGGAGAGAGTTTAGATTCTAGTTTGATGCCAGTGCTTGATCGAACTTTGTTAGATTCGCGAAAACTGAATAAACCACCGCGTTTCGAACACGTTGAGTTTTTCCCACCACCCCTTTGGACAGGTAATTCGTTTCAACATACCAACATGAGACAACAACTTGTTACGGCAATATTGGAACTCACCAAAGGCCGAGTTGAGAAATTGAAGAAGAAAGCTTGTGACTTTGGCGAACGTCGACCTTTTACTAGTTTTGAGGTCATTAGTGGTCACTTGTGGAGGTGTGTTTGCAAGGTGCGTTATGTGGGTAATGGGGATCAACCAACGAGGTTGACTACATTGGTCAATTGTAGAAACCGTTTAAGCCCATCTCTTCCCAAGGCTTATTTTGGGAATGCAACATTTCCAACTGTGACACCAACTTGTTCATTTGATGACATCATGCACAAGCCTCTGAGTTATGCTGTTGGTAAACTAAGGGAAGCAATTGAGAGAATGAATGATGAATATGTAAGGTCTGCTCTTGACTATATAGCAAATTTGAAGGACATGCATTTGTTAAGGAACACATTTTACAACTCTTCAGGAAAAGGAAAATTTAATGGAGACCCGAATCTGTATGTGGTGGGTTGGACCAATTTTTCATACTATGATACGGATTTTGGGTGGGGGAAACCTTTGTGTACGCTTCCAGGGAACGTAAATTCTGATGGTAAGGCTTTCCTTATGGACAATGCTAGGGGTGATGGCTTCATTGTAGCCATTTGTTTGCAAGCATCCCATATTGATGCTCTGAAGAAGTTGTTTTACGAGGATATAGACAAGCCTAGTGCCAAATTGTGA 1371 0.4384 MVTVHRSHVVIPFEDTPSSILSLSHCDQIKLPTHGSQLYLYANTCINNSSFKILMHTLSTSLSKVLTHYYPFAGRLRWIQGGRMQLLCNAKGALLVEASCDHQLKMEDLGDFAPSHVVEQLVPKIDYDVPIEEIPLLAAQLTRFPCGSLILGLAMCRALVDGASVSGFVKSWAKLARGESLDSSLMPVLDRTLLDSRKLNKPPRFEHVEFFPPPLWTGNSFQHTNMRQQLVTAILELTKGRVEKLKKKACDFGERRPFTSFEVISGHLWRCVCKVRYVGNGDQPTRLTTLVNCRNRLSPSLPKAYFGNATFPTVTPTCSFDDIMHKPLSYAVGKLREAIERMNDEYVRSALDYIANLKDMHLLRNTFYNSSGKGKFNGDPNLYVVGWTNFSYYDTDFGWGKPLCTLPGNVNSDGKAFLMDNARGDGFIVAICLQASHIDALKKLFYEDIDKPSAKL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1449 456 Gene3D - 220 448 IPR023213 -
Apr4g1449 456 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 7 451 - -
Apr4g1449 456 Pfam Transferase family 1 446 - -
Apr4g1449 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 451 - -
Apr4g1449 456 Gene3D - 1 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1449 Apr-Chr4 14906430 14907916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1449 2 447 Monolignol Biosynthesis Gene Families AT5G48930 35.347 5.46e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1449 K13065 - gmx:100819383 652.514