Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1431 ATGGCAAATAGATACCATCCCTCAGTGTTTCTGGTGTTGGTTACTATTATACTTTCTATCTATCACTCGGAGCAATTGCAATCCTCTCACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGGACTTTCCTCCTGCTTTAAGCCAGTGGAACAACAACACTGACTTTTGCAACACAGATTCAAACTCTTCTCTCACTGTAGTGTGCTATGAGGACACCATAACACAGCTTCACATAATAGGTGAAAGACGAGATGCACCTCTCCCTAGAAATTTCTCAATAGATTCATTTGTCACTACACTAGTAAGGCTTCCAAGTTTGAAAGTCCTCACTTTGGTGTCTCTTGGTATATGGGGTACACTGCCCAGTAAGATTGCTCGTTTGTCATCACTGGAAATAGTTAATGTGAGTTCCAATTTTCTCTATGGTTCCATTCCTCAGGAGCTTTCATCAGTGTCAAATCTCCAAACACTCATTCTTGACAACAACATGTTTACTGGCCTGCTTCCTTATTGGCTTGATTCACTTCCAGGCTTAACCGTGCTAAGTTTGAAGAACAATTTGTTCAATGGATCTCTACCAAATTCGCTTGGATCCTTGGAGAATTTGAGAACTCTTTCACTTTCTCATAATCACTTTTATGGGGCAGTACCTGATTTGAGCCGTTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCAATTTCCTCTGCTTGGCAACAAGTTGGTTACACTTGTGCTAAGAAACAATAGGTTCAGTGATAGGACTGTCCTGTATGCTCGAAATTGTCTAGAGACTACAAATCAAAATCAGCAGCCACAACCTTTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGAAAGAAGCACAGACAAGTTTCTAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGTTGATTTTCTTTCTTGTTAGAAGAGGAAATGCCAGAAGCAAAATGAAGAGTCCTCCAACAAGATTAATATCAGAAAATGCTGCTTCTGGATACACCTCTAAGTTACTTTCTGATGCAAGGTATATATCTCAAACCAAGAAGTTGGGAGCAGTTGGCCTGCCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGTCAGCTGAAGAATGGCTCACTCGTTGCTATTAGATGCATAGAAATGAAAAAGAGATACAGCACTCAAAACTTTATGCACCACATAGAGTTGATATCAAAACTTCGGCATCGTCATTTAGTCAGTGCTCTAGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAAAGTGTTTCTTGTCTTCGAACATGTACCGAATGGCACGCTCAAGAGTTGGATCTTTGATGGGCATGATAGAAAATCCCTGAGTTGGACTCAACGTATAGGAGCTGCAATTGGAGTGGCAAAGGGAATTCAATTTTTGCATACAGGAATTGTTCCTGGTGTATATTCCAACAATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCAAAAATCAGCAGTTACCACCTGCCTTTGTTATCTAACATGGGAAAGGTTCGGCATGGAAATTCTTCTAGTGGATTAAAAAACTCTAGAATTAATAAAAGTGTAAAGCATGAAGATAAGTCTGATATATATGACTTTGGAATGATACTACTCGAACTCATTCTAGGAAGGAAAATAAAGGCAACGAATGATGCATACGCTTTTAGGGATCTGTTGCAAGCAAGTATAGGAGCTGATGAAGAGGGTAGGAGGAGTATTATTGATCCTGCAGTTCGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTGGTTAAAGAGCCAGCAGATAGGCCCTCTATAGAGGATGTTTTGTGGAATTTGCAGTTTGCATCTCAAGTGCAGGATGCATGGAGAGGGGATTCTCAAAGTAGTGAGGGGTCACCCGGCTCACCTTTAGCCTCTCGAAGATTGCCCTTCCATTAG 2100 0.4081 MANRYHPSVFLVLVTIILSIYHSEQLQSSHSQTLLRIQQLLDFPPALSQWNNNTDFCNTDSNSSLTVVCYEDTITQLHIIGERRDAPLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGTLPSKIARLSSLEIVNVSSNFLYGSIPQELSSVSNLQTLILDNNMFTGLLPYWLDSLPGLTVLSLKNNLFNGSLPNSLGSLENLRTLSLSHNHFYGAVPDLSRLTNLQVLELDDNAFGPQFPLLGNKLVTLVLRNNRFSDRTVLYARNCLETTNQNQQPQPFCHTEALAVGILPERKKHRQVSKVVLSLGIVGGTLGGVALVLLIFFLVRRGNARSKMKSPPTRLISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTASLMGEDSYGKMYRGQLKNGSLVAIRCIEMKKRYSTQNFMHHIELISKLRHRHLVSALGHCFECSLDDSSVSKVFLVFEHVPNGTLKSWIFDGHDRKSLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKNSRINKSVKHEDKSDIYDFGMILLELILGRKIKATNDAYAFRDLLQASIGADEEGRRSIIDPAVRKACLDQSLKTMMEICVRCLVKEPADRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSPLASRRLPFH* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1431 699 MobiDBLite consensus disorder prediction 677 699 - -
Apr4g1431 699 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Apr4g1431 699 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 276 687 - -
Apr4g1431 699 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 259 - -
Apr4g1431 699 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 6 259 - -
Apr4g1431 699 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 276 687 - -
Apr4g1431 699 ProSiteProfiles Protein kinase domain profile. 393 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1431 699 Gene3D Ribonuclease Inhibitor 27 280 IPR032675 -
Apr4g1431 699 Pfam Protein tyrosine and serine/threonine kinase 397 663 IPR001245 GO:0004672|GO:0006468
Apr4g1431 699 SUPERFAMILY L domain-like 33 260 - -
Apr4g1431 699 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Apr4g1431 699 SUPERFAMILY Protein kinase-like (PK-like) 375 670 IPR011009 -
Apr4g1431 699 Gene3D Phosphorylase Kinase; domain 1 364 474 - -
Apr4g1431 699 Gene3D Transferase(Phosphotransferase) domain 1 477 676 - -
Apr4g1431 699 SMART LRR_typ_2 152 175 IPR003591 -
Apr4g1431 699 SMART LRR_typ_2 200 223 IPR003591 -
Apr4g1431 699 SMART LRR_typ_2 176 199 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1431 Apr-Chr4 14558711 14564551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1431 43 697 Miscellaneous Gene Families AT3G03770 55.034 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Apr4g1431 PK_Tyr_Ser-Thr 2.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1431 - - gmx:100807539 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1431 4 14558711 14564551 Apr4g1431 4 14558711 14564551 ECH