Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1430 ATGGCTGAGGCACAAGTGGGTGGCAATGGCTCTTCCGGTGTAGCTAGGCGCAAAGCCTTAAGGCGAGCCATGGGGGCGCCACCATCACAACCTCCATGTGGGGCTTGCAAGTTCTTGAGAAGGAAGTGCCATGGTGCGTGCACTTTTGCACCTTACTTTAGTTCAGACCAAGGTCCTGCACGCTTTGCAGCTGTGCACAAAGTGTTTGGTGCAAGCAATGTTGCAAAGCTCTTGTTGCATATTCCGATGGAGCGCCGCCGTGAAGCGGTGGCTACTATAACGTACGAGGCTCAGGCTAGGCTTGCTGATCCTGTTTATGGTTGCGTCTCCACTGTACTTGCTTTGCAGCAACAGGTGGCATCGCTGCAAGGAGAGCTTGCTATGGTGCAAAATCAGTTGATAAATGCTAAGTTGGCATATGCAAGTGCTCTTCAGAACATGCAACAGCAACAACAGCACTATCAACCATACATGAATGTACCTGTGCAGCCATCATTCTCCAACAATTCAAGTGCTTCCACCAACCCCATGAACATTAACTACTTCAACCCTGGTTTCAACCATGCAATGGAGGCAGCACCTTCATCACACAGCTTTGAGCCCCTTCAAATGTCTCCCTTGTCCCATGATGAGGAAGGGGATGAGGAAGAAAGCAGGATCCCCTTCAACCGTGGCATAGTACTTAACCGCCATTGA 696 0.5029 MAEAQVGGNGSSGVARRKALRRAMGAPPSQPPCGACKFLRRKCHGACTFAPYFSSDQGPARFAAVHKVFGASNVAKLLLHIPMERRREAVATITYEAQARLADPVYGCVSTVLALQQQVASLQGELAMVQNQLINAKLAYASALQNMQQQQQHYQPYMNVPVQPSFSNNSSASTNPMNINYFNPGFNHAMEAAPSSHSFEPLQMSPLSHDEEGDEEESRIPFNRGIVLNRH* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1430 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 217 - -
Apr4g1430 231 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Apr4g1430 231 Coils Coil 112 132 - -
Apr4g1430 231 MobiDBLite consensus disorder prediction 194 231 - -
Apr4g1430 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 16 217 - -
Apr4g1430 231 MobiDBLite consensus disorder prediction 207 221 - -
Apr4g1430 231 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1430 Apr-Chr4 14518395 14519582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1430 1 226 AS2 family AT3G03760 50.000 8.64e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr4g1430 LOB 2.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1430 - - aprc:113866578 259.225