Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1424 ATGCAGAGAAGGAAACTAGAAAACATGGCAGAAGAGGATTCGAAGCCTCTGACCTATATTCCAGAGGTTATGCTGAAGAAGAGGAAGAGTAACGAAGCTTGGGCATTGAGAAAAAAAGCACAATTCCAGAACAAAAAGTTCCGCTCCAAGGACTCCATCAAGAAGCCCGAGGATTTCGTTCACGAGTATCGAAACCAAGAGGTGGACCTTATAAGAATGAAACGGAGGGTAAAGAGGAAATTGCCTGAACAATTGATCCCCGAATCCAAGCCGTTAATAATTATTCGGATACAGGGGAAAAAAGACATGCATCCAATGACCAGAAAGGTATTATACAGCTTGGGATTGAGAAGTGTTTTCAGTGCTGTGTTTCTGAAGCCAAATGACGGAATAATGGGCAAGCTGCTGAGAGTGGAACCATATGTAACCTATGGATATCCAAATCTTAAAAGCATTAAGGAGCTAATTTACAAGAAAGGACATGCAAAAATAGATAAGCAAAAAGTTCCCTTGACAGATAATAACATCATTGAACAGGAATTAGGAAAGTTTGGTATTTTATGCATAGAAGACATGGTGCATCAACTCTATAATGTTGGTCCACACTTTAAGGAAGTCGTCAGATTTTTGTGGCCCTTTCAACTCAACAAGCCAGCTGAAGGATTGAAAGGATCAAAAACCCTATACAAGGATGGTGGAGACACAGGAAACCGTGAGGATCTCATCAATGAACTAATCAATAAAATGAATTAA 753 0.3984 MQRRKLENMAEEDSKPLTYIPEVMLKKRKSNEAWALRKKAQFQNKKFRSKDSIKKPEDFVHEYRNQEVDLIRMKRRVKRKLPEQLIPESKPLIIIRIQGKKDMHPMTRKVLYSLGLRSVFSAVFLKPNDGIMGKLLRVEPYVTYGYPNLKSIKELIYKKGHAKIDKQKVPLTDNNIIEQELGKFGILCIEDMVHQLYNVGPHFKEVVRFLWPFQLNKPAEGLKGSKTLYKDGGDTGNREDLINELINKMN* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1424 250 CDD Ribosomal_L7_archeal_euk 92 250 IPR035808 -
Apr4g1424 250 Pfam Ribosomal L30 N-terminal domain 20 80 IPR012988 -
Apr4g1424 250 PANTHER 60S RIBOSOMAL PROTEIN L7-1 11 250 - -
Apr4g1424 250 TIGRFAM uL30_euk: 60S ribosomal protein uL30 21 250 IPR005998 GO:0000463|GO:0003735|GO:0022625
Apr4g1424 250 Pfam Ribosomal protein L30p/L7e 92 142 IPR016082 -
Apr4g1424 250 Gene3D - 92 250 IPR036919 -
Apr4g1424 250 SUPERFAMILY Ribosomal protein L30p/L7e 93 250 IPR036919 -
Apr4g1424 250 PANTHER 60S RIBOSOMAL PROTEIN L7 11 250 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1424 Apr-Chr4 14404027 14405956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1424 9 250 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.275 1.62e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1424 K02937 - gmx:100500005 404.06