Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1421 ATGGCACCCTTTTTCTCCAAGTTCAAGCTTCAATCAAGAAAACTCACTCTTGTCCTCAACTTGTGTTTCATCATTCTCCTCTTTCTTCTTCTAAATGATTATCTTCACCCTTATAACCCAAACTTTCAAGGCCATTCTAATGCCCCTCTTACAATCTTCAACCGTGCAAGGTTGCTTAGAGATATTAGTGTTGAAGGCTGCACCAACCTACACAATTATTCAGATTATAGCTCTAAGTGCTTATATGTGAAAAACCATCTTGATTGCAGGTCAAAAGGGTACATAAATTATCTTCAAATATTCTATTGTAATCTAGGAAAATATCCAATTTCGGGACAGGTCCTTCTTGCCTTATGGCTTGTGGTGTTGTTCTACCTATTGGGTGACACAGCTTCAAACTACTTTTGCAACTCCTTGGAAGGTTTGTCCAGCATCTTGAGGCTCTCTCCCACCATTGCTGGAGTGACCCTTTTGTCTTTGGGAAATGGGGCTCCTGATTTTTTTGCTAGTGTTGTTTCTTTCACTGGATCATCCAACAATGGTGCTGTTGGACTCAACAGCATTTTGGGAGGGTCTTTCTTTGTGTCTTGTGCTGTCTTGGGGATTATAAGCATTCTTGTTAGCCAAGACCAATTTGCAGTTAATAAAGTTAGTTTCATTAGGGACACCCTTTTCTTCCTTTTCTCTCTTCTCATCCTCCTTGTCATCATTTACATTGGTACAATTAACTTGTTGGGTTCAGTCTGCTATGTTTGTATCTACTTTCTTTATGTGTGTGCTGTCTCTGCCACACACCTTATCTATGGAGAGGGCAAAAATGAAAGGGGATACTCAGTGTCTTCTGATGAGTTACTAGAGACTAGCATACCTTTGTTGGGGTGTGTTGATGATGAGAAGCAAAGTTTGGCAGAGATAGTGATTGTTGAAGATAAGGAGGAAAAGCCAGAGAATTTTGGTAATAATTCATTATTTGATTGTGTTAGCTTGGGGAAGTTTGTACAAGTACTAGATTTACCTCTTTGCTTACCAAGAAAGCTTACAATACCAGTGGTGAGTGAGGATAAATGGTCAAAACCATATGCAGTTATATCTGTCACATTAGCACCAGTTTTATTAGCTGTTCTTTTCAATACTCAAAGGGAAAATGTAAGTTCAAGAAGCAATGTAGTTATCTACATAATAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACTGAGAGGTGTAGCCCGCCAAGAAAGTCTTTGTTTCCATGGCTGGCAGGGGGTTTTGTAATGAGTGTAACATGGACTTATATAATTGCTGAGGAGTTGGTTTCCCTCTTGGTTTCAATAGGGAACATCATTGGTATTAGTCCTTCAATCCTTGGGTTAACTGTGCTAGCTTGGGGTAACTCACTTGGGGATTTGATAGCCAATGGTGCCATGGCTTTGAATGGTGGGTCAGATGGTGTCCAAATGGCTATATCAGGGTGTTATGCAGGTCCTATGTTTAATACTTTGATGGGTTTGGGCTTGCCTCTTGTTCTCTCAGCATGGTCTGAACATCCAGACTCTTATGTTATTCCTAAGGATCCTTCACTCTACGAAACAATTTTGTTCTTGATGGCTGGGGTGCTTTTGGCCCTCGTCATATTGCCAAAGAAGAATATGAGGCTGGATAAATCCTTAGGAGCAGCACTCTTGAGTGTATACCTATGCTTTTTGTTTATAAGGTTAGCTATGGCTATTGGTGTTGTCAAATTCTAA 1761 0.4032 MAPFFSKFKLQSRKLTLVLNLCFIILLFLLLNDYLHPYNPNFQGHSNAPLTIFNRARLLRDISVEGCTNLHNYSDYSSKCLYVKNHLDCRSKGYINYLQIFYCNLGKYPISGQVLLALWLVVLFYLLGDTASNYFCNSLEGLSSILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSNNGAVGLNSILGGSFFVSCAVLGIISILVSQDQFAVNKVSFIRDTLFFLFSLLILLVIIYIGTINLLGSVCYVCIYFLYVCAVSATHLIYGEGKNERGYSVSSDELLETSIPLLGCVDDEKQSLAEIVIVEDKEEKPENFGNNSLFDCVSLGKFVQVLDLPLCLPRKLTIPVVSEDKWSKPYAVISVTLAPVLLAVLFNTQRENVSSRSNVVIYIIAALIGIVLGNMACVTTERCSPPRKSLFPWLAGGFVMSVTWTYIIAEELVSLLVSIGNIIGISPSILGLTVLAWGNSLGDLIANGAMALNGGSDGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSEHPDSYVIPKDPSLYETILFLMAGVLLALVILPKKNMRLDKSLGAALLSVYLCFLFIRLAMAIGVVKF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1421 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 586 - -
Apr4g1421 586 PANTHER CATION/CALCIUM EXCHANGER 1 6 586 - -
Apr4g1421 586 Pfam Sodium/calcium exchanger protein 424 577 IPR004837 GO:0016021|GO:0055085
Apr4g1421 586 Pfam Sodium/calcium exchanger protein 117 260 IPR004837 GO:0016021|GO:0055085
Apr4g1421 586 Gene3D - 360 578 IPR044880 -
Apr4g1421 586 Gene3D - 148 288 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1421 Apr-Chr4 14331410 14333332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1421 69 585 Antiporters AT5G17860 51.731 3.57e-174 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1421 K13754 - gmx:100811635 872.078