Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1420 ATGGCTACTATCACAGTTTCTCTCTCCAAACGCATGGGTTTCACTTTCACCTTGCTGTTCTTGAACACCTCGTTTCTCACGGTGGTGTTTTGTGCTTCACTTGTCGGTTATTTCCACTCTTCAGAACTTCTTTTTATAAGGAGCAACCACTTTGCCTTTGGTGGTAGCGGTGAGCATGATTGCAAGAGCTTCCACAGCCTAGGTGACTACAAAGCCAAGTGCTTGTTCTTGAAATCCAATGAACCGTGTGTCTCTCAGGGCTATGTTGATTACCTTTACCTTTTCTATTGCAAATTTGGGGGATTACCTCTATTGGGTCACTCTCTTTTGTTTCTCTGGCTTTTGGTTCTGTTCTATCTGTTGGCTAACACTGCTTCTGAGTACTTTTGTCCCTCTCTTGAGAATTTGTCCAAGCTGTTGAGGCTCTCTTCTACAATTGCTGGGGTGACTCTCCTCTCTCTTGGCAATGGTGCTAGTGATGTTTTTGCCACCCTTGTCTCTTTCAACGGGAGTGGGACCCGCGACATTGGCTTTAACACTGTGCTTGGGGGTGCTTCCTTTGTGTCCTGTGTTGTGGTGGGAATAGTAAGCATTTCAATTCGGCATCGGGGAATTCGGGTTAAGAAGTGGGCATTGATAAGAGATGCGTGTTTTCTTCTCTTGGTTCTTCTGTGTTTGTTCACCATTTTGATCACTGGCGAGATCAATGTTACTGGAGCAATTGCCTTTTGCTTGATGTATGTGGTGTATGTGTTTGTTGTTTATGTCTCATCTGCAAGAGGGAAAGGTGGATGTGAAGATGCTGAAAGTAACGGTGATTTGAGTCGTGGCGATGGGAGTGATTTAGGTGTCCCTTTGCTCAGTGGGATGGAGAAAGGACTAATTGATTCTGCTGCAAATGGAGCTCAGGAATGTGACATCAAGATTGAGAGGAAATGCTTCTGTACACAATCTTCAATGTGTAGAATGGCACTTTTTGTATTGGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGAGAGATGGTCCAAATTGTATGCAGTTTCTTCTGCTGTGCTAGCACCATTTCTCTTGTCATCCTTGTGCAAGGAAAAAAGCTTCAAATCAAGCGTTATAGTTAATGGAATTGGATTGTTGGTTGGAATTATATTAGGGGTAACTGCATTTTTCACAACAGAAGTCTCAAGTCCACCAAGAAAATACTTGTTTCCTTGGCTTGCAGGAGGGTTTGTGATGAGTGTGACTTGGAGCTACATCTCAGCTCAGGAATTGGTGGGGTTGTTGGTTTCACTTGGTTACATATGTGGAGTTAGTCCTTCCATACTGGGATTAACAGTTCTTGCTTGGGGTAATTCACTAGGGGATTTAGTTACAAATTTGACAATGGCTTTAAATGGTGGACCTGAAGGTGCTCAAATAGCAATATCAGGGTGTTATGCCGGCCCTATCTTCAACACATTGGTTGGATTGGGCTTATCTCTTGTTAGCACTACTTTGTCTGAGTACCCATCATCTGTTGTGATCCCTAGAGATCCATATCTATGGGAGACATTGGCACTTTTGGTGGTTGGATTGGTTTGGGCACTTGTTGTTTTGATTAGAAGAGATATGAAGCTGGATGCACTCTTAGGAGGAGGGCTTTTAGTTATTTACTTCATTTCTCTTTTTCTGAGGCTGATTCAGACACTTGGGTCTCTCCAATTTCAGGATATGTTAGCCCTAGTCTTCAAAAGATGA 1755 0.4313 MATITVSLSKRMGFTFTLLFLNTSFLTVVFCASLVGYFHSSELLFIRSNHFAFGGSGEHDCKSFHSLGDYKAKCLFLKSNEPCVSQGYVDYLYLFYCKFGGLPLLGHSLLFLWLLVLFYLLANTASEYFCPSLENLSKLLRLSSTIAGVTLLSLGNGASDVFATLVSFNGSGTRDIGFNTVLGGASFVSCVVVGIVSISIRHRGIRVKKWALIRDACFLLLVLLCLFTILITGEINVTGAIAFCLMYVVYVFVVYVSSARGKGGCEDAESNGDLSRGDGSDLGVPLLSGMEKGLIDSAANGAQECDIKIERKCFCTQSSMCRMALFVLEMPLYLPRRLTIPVVCEERWSKLYAVSSAVLAPFLLSSLCKEKSFKSSVIVNGIGLLVGIILGVTAFFTTEVSSPPRKYLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMALNGGPEGAQIAISGCYAGPIFNTLVGLGLSLVSTTLSEYPSSVVIPRDPYLWETLALLVVGLVWALVVLIRRDMKLDALLGGGLLVIYFISLFLRLIQTLGSLQFQDMLALVFKR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1420 584 PANTHER CATION CALCIUM EXCHANGER 3 573 - -
Apr4g1420 584 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 3 573 - -
Apr4g1420 584 Pfam Sodium/calcium exchanger protein 111 255 IPR004837 GO:0016021|GO:0055085
Apr4g1420 584 Pfam Sodium/calcium exchanger protein 412 564 IPR004837 GO:0016021|GO:0055085
Apr4g1420 584 Gene3D - 352 565 IPR044880 -
Apr4g1420 584 Gene3D - 142 268 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1420 Apr-Chr4 14293732 14296168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1420 12 573 Antiporters AT5G17850 53.125 1.75e-166 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1420 K13754 - gmx:100787016 818.92