Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1409 ATGAAGATCATAATCCTCTTCTTTTGCTTTGTTCTTCCCTTGGCACTTGCAGACCTGAAGGTTGGATTCTATGGCTCCTCGTGCCCGAAAGCAGAGTCAATTGTGCAGCAAGTGGTGCAGAAGCGGTTCAGTCGTGACAAGTCCATTACTGCAGCCTTACTTCGCTTGCATTTTCATGATTGTGCTGTCAGAGGTTGTGATGCATCCATTCTCATAGACTCCACGGACGACACGCCAGAGAAAGAATCAGGTACAAACGATGGCGTACGAGGATTCGATCTGATCGATGAGGTGAAGGAGAGCCTTGAAGCAGCATGTCCTTCAACAGTGTCATGTGCAGATATCATAACACTGGCTACAAGAGATGCCGTGGCCTTATCTGGAGGACCCAAATACGATGTTCCCACAGGAAGACGCGATGGCTTAGTCTCCAACACTAACGATATCAAGATTCCAGGACCCAGCAATCCCGTCTCCGTAATATCACAATTTTTTGCCAGTAAAGGCATAACAACACAAGAAATGGTGACCCTTTTTGGTGCTCACACCGTTGGTGTTGCGCACTGTAGTTTCTTTTCTGATAGACTTTCCAACTCCCAAGGGAAACCTGACCCTACAATGGACCCTTCGTTGAGTGCTAATTTGATAAAGCTGTGCAATTCAACTGCCGACCCAGCGACACCTTTGGACCAGCAGACATCTTTTCTTGTTGATAATCAGTTCTATAAGCAGATTCTTGTTAAGAGAGGTGTGTTGGAGATTGATCAGCAACTTGCCTTGGATACAAGCACCAAGAGCTTTGTGTCAGATTTGGCGTCAAATGAGGATCGTTTTGAGAATAGTTTCGCCAGTGCAATGATAAAGATGGGGAAGATAGATGTTCTTGTTGGAAATCAAGGAGAAATTCGCAAGAAATGCTCGGCTTTCAATAACCGTAGCTAG 942 0.4554 MKIIILFFCFVLPLALADLKVGFYGSSCPKAESIVQQVVQKRFSRDKSITAALLRLHFHDCAVRGCDASILIDSTDDTPEKESGTNDGVRGFDLIDEVKESLEAACPSTVSCADIITLATRDAVALSGGPKYDVPTGRRDGLVSNTNDIKIPGPSNPVSVISQFFASKGITTQEMVTLFGAHTVGVAHCSFFSDRLSNSQGKPDPTMDPSLSANLIKLCNSTADPATPLDQQTSFLVDNQFYKQILVKRGVLEIDQQLALDTSTKSFVSDLASNEDRFENSFASAMIKMGKIDVLVGNQGEIRKKCSAFNNRS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1409 313 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Apr4g1409 313 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 173 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 Pfam Peroxidase 35 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PANTHER PEROXIDASE 25-RELATED 10 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 ProSiteProfiles Plant heme peroxidase family profile. 18 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 Gene3D - 22 310 - -
Apr4g1409 313 CDD secretory_peroxidase 19 309 IPR033905 GO:0004601|GO:0042744
Apr4g1409 313 Gene3D Peroxidase, domain 2 152 289 - -
Apr4g1409 313 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Haem peroxidase superfamily signature 174 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 SUPERFAMILY Heme-dependent peroxidases 18 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr4g1409 313 PANTHER PEROXIDASE 44-RELATED 10 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1409 Apr-Chr4 14079257 14080311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1409 4 311 Peroxidase AT4G26010 58.387 3.43e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1409 K00430 - gmx:100777946 482.641