Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1408 ATGGAGGATCAGGGGCAACAGGACCCAAACACAAACACTAGTCCAAGCCATGGCACCGAGAAGAGTGAACCGGTTCGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATACTCGAATCCATCTTCAACAGTGGCATGGTGAACCCCCCAAAGGACGAAACCGTAAGAATAAGAAAACTACTTGAGAAATTCGGCACCGTCGGTGATGCCAACGTTTTCTATTGGTTCCAAAACCGCCGTTCAAGATCTCGCCGCCGCCAGCGCCAGATGATGCAGCAAGCCGCCGCCACCCTTGATCAAACAACACATAACCCTCAACCTCAACCCCAACCTCAACCTCAACTTGTTGTTGATGGTGCAATTCCACATGATCAAGTGAATATTCCAACTCAGGCTAATCTTCTTGTTGCAACTGAGGCTTCAACCATGGGTTTTGGTTCTTCTTCTTCTATTAGTTATGATCTACATGGTTCGTCTTCATCATGTGATGGTGCAGTTGGTGGCCAAGATGGATTCTTTTCGGTTTCTTCTCAAATGGGTTTCCCTGGAATAATTGATCAGGGTTCAATTGCATCTTCAGTTTTGTACCCTCCCCTTGATTCTGATTTGAGCTTCCACCCTGGATACGGGATCCCAAATTATTCAGGATTCATCACAGTATTTATCAATGGGATTGCAACAAATATTCCAAAGGGACCAATAGATATGAAAACATTGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGATTGCCAGTTCCCACCAATGAATTTGGGTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTATTTTCTGGTATCAAAGCCAACACAAGCATGA 849 0.4499 MEDQGQQDPNTNTSPSHGTEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQAAATLDQTTHNPQPQPQPQPQLVVDGAIPHDQVNIPTQANLLVATEASTMGFGSSSSISYDLHGSSSSCDGAVGGQDGFFSVSSQMGFPGIIDQGSIASSVLYPPLDSDLSFHPGYGIPNYSGFITVFINGIATNIPKGPIDMKTLFGEDVMLVHSSGLPVPTNEFGFLMQSLQHGESYFLVSKPTQA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1408 282 MobiDBLite consensus disorder prediction 82 114 - -
Apr4g1408 282 Gene3D - 26 93 - -
Apr4g1408 282 SUPERFAMILY Homeodomain-like 20 93 IPR009057 -
Apr4g1408 282 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g1408 282 MobiDBLite consensus disorder prediction 1 31 - -
Apr4g1408 282 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Apr4g1408 282 MobiDBLite consensus disorder prediction 89 106 - -
Apr4g1408 282 SMART HOX_1 24 91 IPR001356 GO:0003677
Apr4g1408 282 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 279 - -
Apr4g1408 282 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 279 IPR044558 GO:0003700|GO:0048830
Apr4g1408 282 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1408 Apr-Chr4 14063380 14065315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1408 14 280 Wox Gene Family AT5G17810 48.252 9.72e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr4g1408 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1408 - - gmx:100791266 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1408 4 14063380 14065315 Apr4g1408 4 14063380 14065315 ECH