Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1369 ATGTATCACACGAAGAAGTTTTCGCCGGCAAGTATGGTCCCACATAAATCTCAAGGTGGAGCTGAACAACTTGCAAATGTTGGTGTTTTGGGTGGATCTGCAGTAAAAAATGCCGCACCTGCTGGGGGAAGTGGGAAACAACGTTTGCGATGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCCACACCAAAAGGTGTTCTTAGAGTGATGGGTGTACCTGGACTGACCATATATCATGTTAAAAGCCATTTACAGAAGTATCGCCTTGCAAAGTACTTGCCTGAATCACCAGCTGATGATTCTAAAGATGAAAAAAGGAATTCTGGAGATAGTGTTTCTGGCACAGATTCATCCCCGGGATTGCCAATCAATGATGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTACATGAACAACTTGAGGTTCAAAAACAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAAAAAATAATAGAGGAACAACAGAAATTAGGTAGCACATTGACATCCTCGGAAACTCTTCCATTGTCCAATGATAAGCAAAACTATCCCCAGTCTGAGCCTTCTGGATCTAGTGATACCCTTGCAGGCACCTTGTCTCCACTTAAAAAACAGAGAACCGATGATGGTTCAAAGGATGGCTTCACTGCTTCCCAAGTAAGAAAGATCGCACAAAAGAATGACTGTAATGTTGTTCAGTTGGAATCAAACTTGTATGAGGATGATGCTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAAGATAAGGAGAGTGGACAGTAA 831 0.4212 MYHTKKFSPASMVPHKSQGGAEQLANVGVLGGSAVKNAAPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADDSKDEKRNSGDSVSGTDSSPGLPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTSSETLPLSNDKQNYPQSEPSGSSDTLAGTLSPLKKQRTDDGSKDGFTASQVRKIAQKNDCNVVQLESNLYEDDAGFGFDLETKKDEDKESGQ* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1369 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 269 IPR044848 GO:0003700
Apr4g1369 276 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Apr4g1369 276 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Apr4g1369 276 MobiDBLite consensus disorder prediction 106 121 - -
Apr4g1369 276 MobiDBLite consensus disorder prediction 183 232 - -
Apr4g1369 276 PANTHER OS05G0491500 PROTEIN 3 269 - -
Apr4g1369 276 Gene3D - 45 104 - -
Apr4g1369 276 Coils Coil 135 155 - -
Apr4g1369 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Apr4g1369 276 MobiDBLite consensus disorder prediction 106 134 - -
Apr4g1369 276 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
Apr4g1369 276 MobiDBLite consensus disorder prediction 183 216 - -
Apr4g1369 276 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1369 Apr-Chr4 13440221 13444580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1369 42 176 G2-like Transcription Factor Family AT4G28610 57.778 1.07e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr4g1369 Myb_DNA-binding 2.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1369 - - gmx:100783132 466.848