Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1368 ATGGGATCTCAAGGTGGGGCAATCCAAGAGCCAAAGCCTGGGGCTTTGGCCAGGCAAGGGTCTATGTACAATCTCACCCTTGATGAGGTGCATAATCAGCTTGGAAATTTTGGGAAACCTCTAGGAAGCATGAATCTAGATGAGTTGCTAAAGAGTGTGTGGACTGTTGAATCTGGAACTGATGCTTACATGCAGCATGGTCAGCTTCAGGTAGCTTCTGGGTCATCTTTGAATCCACAGGGAAGCCTAACATTGTGTGGTGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTGGTAGTAGTCAAGATAGGAAAACTCAAGAAAGACAACCTACACTGGGTGAGATGACGCTGGAGGATTTCTTGGTGAAGGCAGGGGTGACTCCTGAGTCTTTTTGTAATGAGGATAATGCTATTGCTATGTCAGGGGTTGATTCTCAACACAATGCATCCCAGCATGCTCACTGGATGCAGTACCAACTTACTTCAGTGCAGCAGCAGCCACAACAACAGCATCAGCAGCAAAATCAGCAGAGTAGTGCGATGCCAAGTTTTGCGGGTTTTATGGCTGGCCATGTGGTTCAACAGCCTCTACCGGTTGTGGTGAATCCAGTTCTGGATGCTGGATACTCTGACACAATGCCATCTTCTTTGTTGGGTGCTTTATCAGATACACAGACTCCAGGGAGGAAAAGGGTTGCCTCTGGTAATGTGGTTGAGAAAACTGTTGAGAGGAGGCAGAAGAGGATGATTAAAAATAGAGAATCTGCAGCTCGGTCCCGTGCTAGAAAACAGGCTTACACACAAGAACTGGAGATTAAAGTTTCACGTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACGGAATGAGATAGAGAGGGTGTTGCCAACTGTTCCACCGCCTGACCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 972 0.464 MGSQGGAIQEPKPGALARQGSMYNLTLDEVHNQLGNFGKPLGSMNLDELLKSVWTVESGTDAYMQHGQLQVASGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSGSSQDRKTQERQPTLGEMTLEDFLVKAGVTPESFCNEDNAIAMSGVDSQHNASQHAHWMQYQLTSVQQQPQQQHQQQNQQSSAMPSFAGFMAGHVVQQPLPVVVNPVLDAGYSDTMPSSLLGALSDTQTPGRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRRNEIERVLPTVPPPDPKHQLRRTSSAPL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1368 323 MobiDBLite consensus disorder prediction 288 323 - -
Apr4g1368 323 CDD bZIP_plant_BZIP46 253 283 - -
Apr4g1368 323 PANTHER BZIP TRANSCRIPTION FACTOR 2 321 - -
Apr4g1368 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 321 IPR043452 GO:0003700|GO:0045893
Apr4g1368 323 MobiDBLite consensus disorder prediction 101 118 - -
Apr4g1368 323 SUPERFAMILY Leucine zipper domain 253 299 IPR046347 GO:0003700|GO:0006355
Apr4g1368 323 Coils Coil 269 303 - -
Apr4g1368 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
Apr4g1368 323 MobiDBLite consensus disorder prediction 101 121 - -
Apr4g1368 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Apr4g1368 323 Pfam bZIP transcription factor 253 298 IPR004827 GO:0003700|GO:0006355
Apr4g1368 323 MobiDBLite consensus disorder prediction 170 189 - -
Apr4g1368 323 Gene3D - 251 303 - -
Apr4g1368 323 SMART brlzneu 249 317 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1368 Apr-Chr4 13432717 13436584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1368 1 323 bZIP Transcription Factor Family AT3G56850 55.015 5.79e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g1368 bZIP_1 2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1368 K14432 - gmx:100783666 461.07