Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1363 ATGGGACGAATGAGGCTTGTGGTGTCAGATTTCGTTCTATCTTTCATGTGGGCTTGGTCGGGTGTTTTGGTTCGGATATTTGTCTTCAGAAACCTTGGCTTTGATCACGACCACCTCGGCGAGGTCGTTAAGACTGCGTTTTCCATTGCCAACATGTTCCTCTTTGCGTACCTTTCCAAGGTTACGCGTGGTGGGGCCTACAACCCCCTCACCGTTTTGTCCGGTGCTATCTCTGGCAACTTTAGCGATTTCATTTATTGCGTTGCTGCTAGAATTCCCTCTCAGGTGCTTGGGTCTATTGTTGGAGTTAAACTTCTTATTGATACAATTCCTGAAGTAGGACGGGGACCACGTCTGAATATTGACCTTCACCAGGGCGCACTGACAGAAGGATTACTAACTTTTGCAATTGTAACCATTTCACTGGGACTTGCCACTAGAATTCGTGAAAATTTCTTCATGAAGACTTGGATCTCCAGCCTCTCCAAGTTAGCACTTCATGTACTTGGCTCTGATCTGACCGGTGGTTGTATGAACCCCGCATCTGTAATGGGGTGGGCTTATGCTCGCGGAGATCACATAACAAAGGAACACATCCTTGTATACTGGCTTGCCCCCATCGAGGCAACTATTTTAGCAGTGTGGACATTCAAATTACTAGTCCAACCTGTGAAAGAAGATAGAGCAGCCTCAAAAAGTAAATCAGATTGA 711 0.4613 MGRMRLVVSDFVLSFMWAWSGVLVRIFVFRNLGFDHDHLGEVVKTAFSIANMFLFAYLSKVTRGGAYNPLTVLSGAISGNFSDFIYCVAARIPSQVLGSIVGVKLLIDTIPEVGRGPRLNIDLHQGALTEGLLTFAIVTISLGLATRIRENFFMKTWISSLSKLALHVLGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIEATILAVWTFKLLVQPVKEDRAASKSKSD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1363 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 - -
Apr4g1363 236 SUPERFAMILY Aquaporin-like 3 229 IPR023271 -
Apr4g1363 236 Pfam Major intrinsic protein 4 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Apr4g1363 236 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
Apr4g1363 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1363 Apr-Chr4 13365987 13370946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1363 1 236 Major Intrinsic Protein MIP AT3G56950 61.181 7.01e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1363 K09875 - gmx:100786138 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1363 4 13365987 13370946 Apr4g1363 4 13365987 13370946 ECH