Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1343 ATGGGAAAAGCCGAAGAAGAACATCAACCTCTGCCTCAGTCCGAGGATCCACCGCAGAATGCGGAGACAGAGTGTCGGTGTTCTCGGATTCGGAAACTCGTTGGTCTTAGATGCATTCTCGTACTGGTGCTGTCTGTTGCGGTGTTTCTCTCTGCCTTGTTTTGGTTACCCCCTTTTCTTCGTCTCGCAGATCGGAAGAATCTGAATGCCGATTACAACGGTCATGATATTGTTGCAAGCTTTAATCTTAATAAGTCAGTCTCTTTGCTAAAAGAAAACTCCTTTCAGCTCGCAGATGAAATTTTTGATGAGATAGATGTTCTCTCTACCAAAGTAGTCATCTTGTCTCTAGATCCCTTACCTGGGCCAAACAAGACAAGAGTGGTGTTTGCAGTTGATTCTGATGATGAAAATACAGAAATGTCTTCAGCTGCCACTAGTTTGATAAAAGCATCATTTACATCCCTGGTTATACACCAATCAATTCTCCAGCTCACTTCTTCATCCTTGTTTGGAGATCCCTTCTTTTTTGAAGTGCTCAAATTTAAGGGAGGAATTACTATAATTCTGCCACAGAATGCATTTCCTCTGCAGAAAGTGCAAACACTATTCAGCTTTAAGTTGAATTTCCCCATTTATCAAATACAATCAAATTTTAATGAGTTAACTACTCAGCTAAAGTCTGGATTACATCTGGCATCCTTTGAGAACTTGCATGTCAGCTTATCAAATTCTGAAGGTTCAACAGTAGATTCTCCTACTGTTGTTCAGACATCTGTTCTACTTGCAGTTGGGATTCCTCCATCAAAAGAGAGGCTAAAGCAGCTGGCACAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACTGAATTTGGTAGGGTTAAGCAGGTCCGACTTTCATCCATCTTGCAGCACTCCCTTCATGGCAGTGATGGTACATGGTCACCTTCTCCTGCTCCTATGCCACATCCATCCTACCACCACCACCACCATCAACACCGACATCATCATCATCATCATCACCATGATGCCCATCTAACTCCTGCAACTTCTCCTGTACCTGTACCTGCACTTGCACCTACACCTATATCTTCACCTGAGGAGGGTATAACTCCACCCAAGGTTGTTTCTCCTGCCACTACAAAACGTGCGCCTTCACCTGGGAAAAATTCTCAGGCTCAGCCTCCTAATTGTCATTTTGGGTATAGAAAAAGGTCTACCCATCATGCTGGGAAGCATGCTCATCTTACACCTGTAGTTGCTCCTAGTATTGATCCACATTATCCTGTTCCTGTTGCATCACCAAAATCACAGGTTGAATCCCCAGCACATGTCCCTCATTCAGTACCTGCTTTGAGCCCTTTACCAAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCTAAGAATGAACCAGCAGCAGAACGTTCACACATTCCTTCTCGTGGACCACCATTATCTTCGTGTTGTCTTGGAACTGTTAAATGGACATATTTGTTCATTGTACTTGTGTTACGTGTATAA 1527 0.4342 MGKAEEEHQPLPQSEDPPQNAETECRCSRIRKLVGLRCILVLVLSVAVFLSALFWLPPFLRLADRKNLNADYNGHDIVASFNLNKSVSLLKENSFQLADEIFDEIDVLSTKVVILSLDPLPGPNKTRVVFAVDSDDENTEMSSAATSLIKASFTSLVIHQSILQLTSSSLFGDPFFFEVLKFKGGITIILPQNAFPLQKVQTLFSFKLNFPIYQIQSNFNELTTQLKSGLHLASFENLHVSLSNSEGSTVDSPTVVQTSVLLAVGIPPSKERLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSSILQHSLHGSDGTWSPSPAPMPHPSYHHHHHQHRHHHHHHHHDAHLTPATSPVPVPALAPTPISSPEEGITPPKVVSPATTKRAPSPGKNSQAQPPNCHFGYRKRSTHHAGKHAHLTPVVAPSIDPHYPVPVASPKSQVESPAHVPHSVPALSPLPNVAFAHAEPPPKNEPAAERSHIPSRGPPLSSCCLGTVKWTYLFIVLVLRV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1343 508 MobiDBLite consensus disorder prediction 463 482 - -
Apr4g1343 508 MobiDBLite consensus disorder prediction 326 346 - -
Apr4g1343 508 MobiDBLite consensus disorder prediction 385 399 - -
Apr4g1343 508 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 505 - -
Apr4g1343 508 PANTHER F20B24.21 1 505 - -
Apr4g1343 508 MobiDBLite consensus disorder prediction 1 22 - -
Apr4g1343 508 MobiDBLite consensus disorder prediction 309 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1343 Apr-Chr4 12954291 12959314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1343 19 505 C3H Transcription Factor Family AT3G10810 46.215 2.27e-93 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1343 - - gmx:100792490 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1343 4 12954291 12959314 Apr4g1343 4 12954291 12959314 ECH