Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1323 ATGTCTGAGTCAATGCACGCCGTCGAATCGCCACCTCCGGTGGTGCCGCCGGCCTCTGATCTCGGATTCGACGACTTCTCCGCCGAGTTCGAGAACCTTCCCATCCCATGCATGGACTCTCTGTTCGACAACGACGCGCTTCCCTCGGAAGCCTTCGCCTCAGATCTCGAATTCGGCTTTGATTTCGGCGACAATGGAGAATTCGAGATCACCTTCGATGATCTCGACAGCATCTGCATCCCCTCCGACGCCGATGATTTCCTTCTTCCCGATGCATGCAACCCTAACGGCGCTTCCATTTCGCCGTCAATCGACGATCCCGGCGATTCTCCTGCAAAAAATTTCGATTATCACATTACCAATTCCGATTCGTTGGATTCCGGCACATCTGCGGTTTCTGGCGATCGAAGCTCCGGCGTTTCTAGGTTTTTCAATTCGCAAGCGTTGGACTCGGTCTCCATTGATAATTCGGGTAAACAGGGCTCGCATAATTCAGTTGATGTTAAAGTTTCTAGCTCTCCTTCGCCGGAGTCGGAATCTAGCGACCGGGAAGAGTCTTCTGATGGACCGGTTTCGTCTCAGGGTTCAGGCAACGGAGGGTCTGGTGTATATGAAGCTATGAACTCGCCCTCACTTGATTCTGGCCGCTATGAGAGGGACATAACATCTTCCCATGGACATGCAGTTATGGATAAAAGTATAAAATTGGAGGAAATTGGTGTTAAAGGTTGTGATCTGAAGAGGAAGAAAGAGTGTTGTGAAGGAAGTGCTGAGAATAGAACTACCAAGTACAGAAGGTCCTCCTCTGTGGCTTTGGAAAACAAGACCCAGGAACAATCTCAATCTGGTGTGAATGCGATTGATGATGAGGACGAGAAAAGGAAGGCCAGGTTGATGAGGAACAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAAAAGCATTATGTGGAAGAGCTTGAGGAGAAGGTAAGATCAATGCATTCCACCATTACTGATCTGAGTAGTAAGATATCGTTTGTCATGGCTGAGAATGCTACGCTTAGACAGCAATTAGGTGCTGGTGTGATGTGTCCTCCTCCTCCTCCAGCGCCAGGGATGTACCCTCATCCTCCCATGGCGCCTATGCCTTATCCTTGGATGCCTTGTGCTCCCTATGTTGTCAAGCCTCAAGGCTCTCAGGTTCCTTTGGTCCCCATTCCTAGGTTGAAGTCTCAGCAGCCAGTTGCAGCTTCCAAGAGTAAAAAGAATGAGGGTAAAAAGACTGAGGTGAAAACCAAGAAGGTTGCCAGTATTAGTTTGTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTCTGGTAGATGTTAAATTTGAAGGTTTAGTAAACAATGTTCCTAGTGGGTATAGCTATGTTAGCGATAGGTTGTATGGTCAGGGTGGAGGTAAGGTTTGGCCTGTGAATGGTGGTCATATAAATGGATCTGAAAGAATCGAGGAAGTAGGATTTTCTAGTGGAGGGTTTGGTGTTTCTGATAGAATTAATTATGAGAGGGGCCGGAAATTGGGAGAAGAAACGCATGAATGGCAAGACCCAAATAGTTTTGTTCATCGGGGCAATGCCAGTGAGCCTCTGGTTGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTATGGCCAGTGAGAAAGCAATGGCTTCTCAAACTGCTGAGGCAAAGAAGGACAAGAGAGAAACTGGTTTGGCCATTCCTACTGATTGGGATTCTGCATTGGCTATTCCTCAAGTTGGAAGAAATAGAGGTCAACATCCACACGTGTATAGGGTTTCTCCTGAACAGAGGAAGGCTCTCGGCTCTGGTTCAACCAAAGCTTTGAAGGACCACATGAAGTCCTCTGCGACTGATGGAAAAATGCAACAGTGGTTTCGGGAAGGTCTTGCAGGGCCCATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCAACTCCTGGTGCTATAGTTCCTGCAACATCAGTAGCCAATATTTCTACCGAGAACCGTCGGAATGCTACCTCAGGCAACAAGACCAGGAATAGAAGAATCCTCCATGGTCTTCCAGATCCATTTGCTGGATCCAGTCTGAACATAACTGAAGAACATGTAAGAAATTCGCATAAAGATCACCTCCATGGTAATAAATCTTCTACGGTGGTTTCGGTGCTTGTTGATCCCAAAGAGGCTGGAGATGGTGATGTTGATGGCGTGGTGACCCCAAAGTCACTCTCTCGGATCTTTGTGGTGGTGCTTATGGACAGTGTCAAGTATGTAACTTACTCATGTGGTCTTCCTCGTGTTTCTCCCCATCTGGTGACTGCTTATGTATGA 2400 0.47 MSESMHAVESPPPVVPPASDLGFDDFSAEFENLPIPCMDSLFDNDALPSEAFASDLEFGFDFGDNGEFEITFDDLDSICIPSDADDFLLPDACNPNGASISPSIDDPGDSPAKNFDYHITNSDSLDSGTSAVSGDRSSGVSRFFNSQALDSVSIDNSGKQGSHNSVDVKVSSSPSPESESSDREESSDGPVSSQGSGNGGSGVYEAMNSPSLDSGRYERDITSSHGHAVMDKSIKLEEIGVKGCDLKRKKECCEGSAENRTTKYRRSSSVALENKTQEQSQSGVNAIDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKISFVMAENATLRQQLGAGVMCPPPPPAPGMYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKSQQPVAASKSKKNEGKKTEVKTKKVASISLLGLFFFIMLFGGLVPLVDVKFEGLVNNVPSGYSYVSDRLYGQGGGKVWPVNGGHINGSERIEEVGFSSGGFGVSDRINYERGRKLGEETHEWQDPNSFVHRGNASEPLVASLYVPRNDKLVKIDGNLIIHSIMASEKAMASQTAEAKKDKRETGLAIPTDWDSALAIPQVGRNRGQHPHVYRVSPEQRKALGSGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPTPGAIVPATSVANISTENRRNATSGNKTRNRRILHGLPDPFAGSSLNITEEHVRNSHKDHLHGNKSSTVVSVLVDPKEAGDGDVDGVVTPKSLSRIFVVVLMDSVKYVTYSCGLPRVSPHLVTAYV* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1323 799 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 1 796 - -
Apr4g1323 799 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 1 796 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 154 226 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 154 177 - -
Apr4g1323 799 SMART brlzneu 289 353 IPR004827 GO:0003700|GO:0006355
Apr4g1323 799 Pfam bZIP transcription factor 292 351 IPR004827 GO:0003700|GO:0006355
Apr4g1323 799 MobiDBLite consensus disorder prediction 187 208 - -
Apr4g1323 799 Gene3D - 291 353 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 256 292 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 115 137 - -
Apr4g1323 799 SUPERFAMILY Leucine zipper domain 293 351 IPR046347 GO:0003700|GO:0006355
Apr4g1323 799 CDD bZIP_HY5-like 294 345 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 98 137 - -
Apr4g1323 799 MobiDBLite consensus disorder prediction 262 284 - -
Apr4g1323 799 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 291 351 IPR004827 GO:0003700|GO:0006355
Apr4g1323 799 Coils Coil 316 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1323 28 797 bZIP Transcription Factor Family AT2G40950 48.276 1.84e-180 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g1323 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1323 K25783 - gmx:100101871 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1323 4 12596622 12600381 Apr4g1323 4 12596622 12600381 ECH