Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1318 ATGGCATCAAGACCCACAGTTCCACAACAAGCCAGAGGTGAAGTAGTGATAGGTGGAGGCAAACAGCAGAAGAAGAACGGTGCAGCGGAGGGAAGAAACCGCAAGGCACTTGGTGACATCGGAAATTTAGCCACTGTTAAAGGAATTGAGGTCAAGCCTAATCGCCCCATAACAAGGAGTTTCTGTGCTCAACTACTTGCAAATGCACAAGCAGCTGCAGCCGCTGAAAATAACAAGAAACAGGCCTGTGCTAATGTAGCTGGGCCTCCTGCTGTTGCTGATGGAGTGGCTAAAAAGGCACCACCTCCAAAACCGGGCCAGAAGAAAGTTAATGTGAAACCAAAGCCAAAGCCTGATGAAATCATCAACATTGAACCAAGTCCAGAAAAAGAGGTTCTTAAAGATAAGTCTGAGAACCAGAAGAAAAAGGAAGGAGATGCAAATATCAAGAAGAAATCACACACTCTTACTTCTGTGCTTACAGCTAGAAGCAAGGCAGCATGTGGTATAACTAACAAGCCTAAGGAGCAGATTGTTGACATTGATTCTGGTGATGTCGACAATGAACTTGCTGCTGTTGAATATATAGAAGATATGTACAAATTCTATAAATTGGTTGAGAATGAGAGCCGCCCCCATGACTACATTGACTCACAACCTGAGATAAATGAGAGGATGAGGGCTATTTTAATTGATTGGCTGATGGATGTTCACTCCAAGTTTGAGCTTTCACTTGAAACCCTTTACCTTACCATCAATATAATTGATCGGTTCCTAGCAGTTAAGACTGTGCCAAGGAGAGAACTTCAATTGGTTGGCATTAGTGCCATGCTTATGGCATCCAAATATGAGGAAATTTGGCCCCCAGAGGTTAATGACTTTGTTTGCCTCTCAGATAGAGCTTATACTCATGAGCAAATATTGGTCATGGAGAAAATCATACTAGGCAACCTGGAATGGATTTTGACTGTGCCTACACCCTTTGTGTTCCTAGTTCGTTTTATCAAGGCATCAGTCCCAGATCAGGAGTTGGAAAACATGGCCCATTTTCTTTCTGAATTGGGAATGATGCATTATGCTACCTTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTGGCAGCTAGATGCACTCTTAGCAAGAGTCCATTTTGGAGTGAGACCCTTAAGCGGCACACCGGTTACTCACAAGAACAACTCATTGATTGTGCTAAACTATTGGTGAGCTTCCACTCCACAGCTGGGAATTCCAAGCTTAAGGTTGTGTACAGAAAATACTCTGATCCTCAAAGAAGTGCTGTTGCTGTGCTCCCACCAGCTAAAAATCTTCTGCCTGAAGGTTCTCTCTTCCAACAGAGTTAG 1368 0.4357 MASRPTVPQQARGEVVIGGGKQQKKNGAAEGRNRKALGDIGNLATVKGIEVKPNRPITRSFCAQLLANAQAAAAAENNKKQACANVAGPPAVADGVAKKAPPPKPGQKKVNVKPKPKPDEIINIEPSPEKEVLKDKSENQKKKEGDANIKKKSHTLTSVLTARSKAACGITNKPKEQIVDIDSGDVDNELAAVEYIEDMYKFYKLVENESRPHDYIDSQPEINERMRAILIDWLMDVHSKFELSLETLYLTINIIDRFLAVKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGNLEWILTVPTPFVFLVRFIKASVPDQELENMAHFLSELGMMHYATLMYCPSMVAASAVLAARCTLSKSPFWSETLKRHTGYSQEQLIDCAKLLVSFHSTAGNSKLKVVYRKYSDPQRSAVAVLPPAKNLLPEGSLFQQS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1318 455 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Apr4g1318 455 SUPERFAMILY Cyclin-like 324 443 IPR036915 -
Apr4g1318 455 SMART Cyclin_C_2 325 442 IPR004367 -
Apr4g1318 455 MobiDBLite consensus disorder prediction 1 33 - -
Apr4g1318 455 SMART cyclin_7 232 316 IPR013763 -
Apr4g1318 455 SMART cyclin_7 329 411 IPR013763 -
Apr4g1318 455 MobiDBLite consensus disorder prediction 94 149 - -
Apr4g1318 455 PANTHER CYCLINS 21 448 IPR039361 -
Apr4g1318 455 Gene3D - 212 323 - -
Apr4g1318 455 Pfam Cyclin, C-terminal domain 325 441 IPR004367 -
Apr4g1318 455 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 448 - -
Apr4g1318 455 Gene3D - 198 437 - -
Apr4g1318 455 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Apr4g1318 455 MobiDBLite consensus disorder prediction 112 149 - -
Apr4g1318 455 CDD CYCLIN 323 410 IPR013763 -
Apr4g1318 455 SUPERFAMILY Cyclin-like 187 320 IPR036915 -
Apr4g1318 455 PIRSF Cyclin_A_B_D_E 1 453 IPR039361 -
Apr4g1318 455 CDD CYCLIN 226 315 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1318 Apr-Chr4 12492909 12495390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1318 1 446 Core Cell Cycle Gene Families AT4G37490 52.155 1.21e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1318 K21777 - gmx:547919 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1318 4 12492909 12495390 Apr4g1318 4 12492909 12495390 ECH