Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1311 ATGTTTCCTCAGCCATGGATGTTGGTAGCTATAATCAGTGCAACCTTATTACCCATGTCCTCAAAGGTTATGTCCTTTCCACAAGCTGATAAGGTGAAAACATTGCCTGACCAGTCACCTGTTTCTTTCCAACAATTTGCTGGCTATGTAGCTGTTGATGACAAGAATCAGAGAGCTCTTTTTTACTACTTTGTTGAAGCTGAAACCAACCCTTCTTCAAAACCTCTAGTTCTCTGGCTAAATGGAGGGCCTGGGTGTACATCTGTTGGGATTGGAGCTTTTACTGAACATGGTCCTTTTGTTACAAACCAAGGAAAGACTATTGTGAAAAATCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACCTTGAATCACCAGCAGGCGTTGGATTCTCTTATTCTGACAACCTGTCATTTTATCAAACACTTAACGACGAGGTCACAGCCCAAGACAACCTGGTTTTCCTGCAGCGCTGGTTTGCCAAGTTCCCAGAGTACAAAAATAGAGATTTTTATATAATCGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTTGCTGCACTCATTATTAAGAGCAAAGTGAATTTCAATCTTAAGGGCATAGCAATAGGAAACCCTCTTCTGGATTTTGACACTGATATGAATGCAGTTGATGAATATTACTGGTCTCATGGAATTATAACTGATTATGCTTACAAAATCAGGATCTCTCTATGTAATTCGTCTAGAATATTCAGAGAAATCTTGAGTGGCCAAATTTCCAAGGATTGTCTGGTTGCAGCTAGAAAAGTCTCAGAAGAATATTCTTTTACAACTTCCATTGACCCATATTATGTTACTGGAGATAAATGTCTTTCTTACAATGTTTCTCAGGCAGGTTTTCTTAGGGAAATGCTAAATTCAGGAATGTTTCAGTTTAGGAAGTCCCTTAATGTGCAGCAAATTGAAGAACCTGACCAGCAAATTGATGAATGTTATCTGAAATATTCAGATATGTACTTGAACAGAAAAGATGTGCAGGAGGCTCTTCATGCCCGGCTGGTGGGAACCACCAATTATCGTTTATGTAGCAAGATCGTGCAAACGAATTATGACCTATTAAGCCGAGAGATATCAACAATTAATGTTGTAGGCTTCCTTGTAAAATCAGGCCTTCGAGTCATTGTTTACAGTGGGGATCAAGACTCTGTGATTCCATTTATGGGCACGAGAAGATTGGTTGATAAACTAGCAAAGAATCTGGGACTTAAAACATCAGTGCCTTATAGTGCTTGGTTTGTGGACAAGCAGGTTGGAGGATGGACACAAGTTTATGGCAATCATCTGACGTATGCCACAGTAAGAGCAGCTTCACATGCCACTCCAACTACTCAACCAAAGAGATCTTTTATATTGTTTAATGCGTTTCTTCAAGGGAAACCACTCCCTAAAGCATGA 1443 0.3971 MFPQPWMLVAIISATLLPMSSKVMSFPQADKVKTLPDQSPVSFQQFAGYVAVDDKNQRALFYYFVEAETNPSSKPLVLWLNGGPGCTSVGIGAFTEHGPFVTNQGKTIVKNQYSWNKEANILYLESPAGVGFSYSDNLSFYQTLNDEVTAQDNLVFLQRWFAKFPEYKNRDFYIIGESYGGHYVPQLAALIIKSKVNFNLKGIAIGNPLLDFDTDMNAVDEYYWSHGIITDYAYKIRISLCNSSRIFREILSGQISKDCLVAARKVSEEYSFTTSIDPYYVTGDKCLSYNVSQAGFLREMLNSGMFQFRKSLNVQQIEEPDQQIDECYLKYSDMYLNRKDVQEALHARLVGTTNYRLCSKIVQTNYDLLSREISTINVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVDKLAKNLGLKTSVPYSAWFVDKQVGGWTQVYGNHLTYATVRAASHATPTTQPKRSFILFNAFLQGKPLPKA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1311 480 Gene3D - 327 364 - -
Apr4g1311 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 479 IPR001563 GO:0004185|GO:0006508
Apr4g1311 480 Gene3D - 376 474 - -
Apr4g1311 480 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Apr4g1311 480 Gene3D alpha/beta hydrolase 27 288 IPR029058 -
Apr4g1311 480 PANTHER CARBOXYPEPTIDASE 5 479 - -
Apr4g1311 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Apr4g1311 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Apr4g1311 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Apr4g1311 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Apr4g1311 480 SUPERFAMILY alpha/beta-Hydrolases 36 478 IPR029058 -
Apr4g1311 480 Pfam Serine carboxypeptidase 38 474 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1311 Apr-Chr4 12313705 12317270 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1311 323 477 Calmodulin-binding Proteins AT2G22960 27.097 2.30e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1311 K16297 - gmx:100819443 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1311 4 12313705 12317270 Apr4g1311 4 12313705 12317270 ECH