Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1309 ATGCTACCTCAGTCATATGCTATGATAACAACAATAATAATTGTTCTTGCACATACCCTTGTGGGGGTGATTTCACTGCCAGAAGCTGATAAGATAAGCACTTTGCCGGGGCAGCCACTAGTCAAATTTCAACAATACTCTGGTTACATTACAGTGGATGAACAGCACCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTGCATCCAAGCCAATAGTCCTATGGTTGAATGGAGGGCCTGGTTGTTCTTCTATTGGAGTTGGAGCTTTTGCTGAGCATGGCCCTTTCAAACCGGGTGACAATAATGTTCTTGTGAAAAATGATTATAGTTGGAACAAAGAGGCAAATGTGCTATACTTGGAATCACCAGCTGGTGTTGGATTCTCTTACTCTAGCAATAAATCTTTCTATGCTTTAGTGACAGATGAAATTACAGCTAGGGATAATCTTATTTTCCTACAGCGTTGGTTCACTAAATTCTCTGAGTATTCAAATAATGATTTCTTTATTACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAACTTGCACAGCTTATTATTCAAACCAAGACCAAATTCAATCTCAAGGGGATAGCAATAGGAAATCCTCTTCTGGAGTTTAATACAGACTTCAACTCTAGATCTGAGTTCTTTTGGTCCCATGGGTTGATATCAGATTCAACTTACGAAGTCTTAACTAGGGTTTGCAACTATTCCACAATTAGGAGACAAATTCAAAATGGAAATCTTGGAGGCGTTTGTGCAACATCAAATAATCTATTGTATACTGAAGTTAGTAAATATATTGATGAATATGATGTCACTCTTGATGTGTGTTTGTCATCAGTAAATCAACAAGTTTATGTGCTGAATCAACTGACACAAAAGATAGATGTTTGTGTTGGTGATGAAACAACCACATACTTAAACAGGAAAGAAGTCCAAGAAGCTCTGCATGCTAATCTTGTTGGAGTCACTAAATGGTCAACCTGCAGCGGAGTTCTTAATTATGATTATCAGAATCTAGAGATACCAACAATTCCAATTCTAGGGACACTAGTTAAATCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTCATTCCATTAACCGGTTCGCGATCTCTAGTGAATGGATTAGCCAAGGAAATTGGACTGAATACAACTGTGTCCTATAGAGCTTGGTTTGAGGAAAAACAGGTAGCAGGATGGACACAAGTATATGGAGACATCTTATCATATGCCACCATAAGAGGAGCATCACATGAAGCTCCCTTTTCTCAACCACAGAGATCACTTGTGCTACTTAAAGCATTTCTGGAAGGGAAGTCACTACCAAGTATTGCATAA 1374 0.3879 MLPQSYAMITTIIIVLAHTLVGVISLPEADKISTLPGQPLVKFQQYSGYITVDEQHQRALFYYFVEAEEDPASKPIVLWLNGGPGCSSIGVGAFAEHGPFKPGDNNVLVKNDYSWNKEANVLYLESPAGVGFSYSSNKSFYALVTDEITARDNLIFLQRWFTKFSEYSNNDFFITGESYGGHYVPQLAQLIIQTKTKFNLKGIAIGNPLLEFNTDFNSRSEFFWSHGLISDSTYEVLTRVCNYSTIRRQIQNGNLGGVCATSNNLLYTEVSKYIDEYDVTLDVCLSSVNQQVYVLNQLTQKIDVCVGDETTTYLNRKEVQEALHANLVGVTKWSTCSGVLNYDYQNLEIPTIPILGTLVKSGIKVLVYSGDQDSVIPLTGSRSLVNGLAKEIGLNTTVSYRAWFEEKQVAGWTQVYGDILSYATIRGASHEAPFSQPQRSLVLLKAFLEGKSLPSIA* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1309 457 Gene3D - 351 450 - -
Apr4g1309 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 455 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Apr4g1309 457 SUPERFAMILY alpha/beta-Hydrolases 35 453 IPR029058 -
Apr4g1309 457 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Apr4g1309 457 Gene3D - 305 341 - -
Apr4g1309 457 Pfam Serine carboxypeptidase 37 450 IPR001563 GO:0004185|GO:0006508
Apr4g1309 457 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Apr4g1309 457 PANTHER CARBOXYPEPTIDASE 8 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1309 Apr-Chr4 12295419 12298492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1309 313 453 Calmodulin-binding Proteins AT2G22960 29.078 2.19e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1309 K16297 - gmx:100799900 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1309 4 12295419 12298492 Apr4g1309 4 12295419 12298492 ECH