Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1274 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGGAAACTGATAGAGAGGCTTCTAAGAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGTAAGGCTTTAGAGTTTCTGGGTTTGCGTGAGAATGATGAGAGCAACCCAAATACACCATCTGTTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATCTTGTTATCACTGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTAAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTGCAAGGATTAACAGATGCTTGGAGGAAGGAGCAGAAGAATTCTTCTTGAAGCCTGTGAGGCAATCAGATTTGAATAAGCTTAAACCCCACATGAAGAAGACCAAATTGAAAGATCAAAGTCAAGAAACAGTAGAAAAACTTGAAAACTCAGAAGTTCAACAGTCACAACAAATACAAAGTGACCAACAAGAAGCTCCAAAATCCCAAGATCTACAACCAGAGTCAGAGACACATTCACGGCCAACTATAGAACAACAGCAACAATCACTACAACAAGCCAACAATAACAAGAGAAAGACCATGGAACAGGGTCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 714 0.4132 MGMAAESQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPNTPSVSPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRQSDLNKLKPHMKKTKLKDQSQETVEKLENSEVQQSQQIQSDQQEAPKSQDLQPESETHSRPTIEQQQQSLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1274 237 MobiDBLite consensus disorder prediction 140 237 - -
Apr4g1274 237 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Apr4g1274 237 MobiDBLite consensus disorder prediction 140 159 - -
Apr4g1274 237 CDD REC_typeA_ARR 11 141 - -
Apr4g1274 237 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Apr4g1274 237 MobiDBLite consensus disorder prediction 160 216 - -
Apr4g1274 237 SMART REC_2 9 142 IPR001789 GO:0000160
Apr4g1274 237 Gene3D - 10 227 - -
Apr4g1274 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 233 - -
Apr4g1274 237 Coils Coil 197 217 - -
Apr4g1274 237 SUPERFAMILY CheY-like 8 161 IPR011006 -
Apr4g1274 237 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 233 IPR045279 GO:0009736
Apr4g1274 237 Coils Coil 147 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1274 Apr-Chr4 11684628 11686685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1274 1 237 Response Regulator Gene Family AT3G57040 65.966 1.73e-104 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr4g1274 Response_reg 5.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1274 K14492 - gmx:100814494 372.474