Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1267 ATGAAGGATGAAATTGAAGGAAGCTACAGTGATTATGATGAATCTCAGAGAGTTCCTGGAACAAAGGAATCTATTTCCAGCCTGCCAGAAAATAGAGGAAGATTGGAATCAAAGAGAAAACTGAAGAAAGTGAGGTCAATTAGGCTTGGAAGATTATCAAGCATGAGATCATCAACTAGAAGGGGGAAACCCCAATATGATGATCTCATCATTCTCTCATCTGTTGGCACAGAAAGTTTGGAGGGGCCAACCCCAATTGACATGGCAGATGCATCACCTAATTACATGAAGGCTACCAGCAGTTCTCATGCAAAGGATAGTTTTCAGCCAAAGAGGAAATTGAAGTCATCAAGATCAATCAAGTTTGTAGCTGTTAAGGGTCCAAAATCAACAAGAAAGCAATCTGAATCTACCTGTGGCAGTGATGATCAAAATGGGAAAAGTACATGTGATGCTAGCAGTAAACCTCAGAGAGTCATTACCAGAAGATTAAGCTTCAAACCTGTGAGGATGTTAACAAAAATGCCCACTTTCAAAGCAAAGAATTCTTCCAAATCAGACTCAAGCTTGCATAGAGCCACATGTTCTTCCACTCTCAAGGATTCCCATTTCCCTGATCACATTGACCTTCCTCAAGAGGCAAGTACATCTCAAGGAGTATCATCTATGAAGGTTTGTCCATATACTTACTGCTCTCTTCACGGTCATCGCCATGGCAATATGCCTACGTTGAAGCGCTTTGTGTCAATGAGGAGGCGTATGTTGAAGACCCAAAAGACCATGAAAATGGACGGTCAACCTGTTAATAGATCAAAGCAGTTTGGAAATGCAAGGAAAGCCGCTCCAAAAGCCCAAACTGTTCACAGCGAAGATGGCAGATCTCATTTTCAGAACATGAAAAAGATGGCAAGTGACTCACATATTAGGCCTCATGGCACTCCAACATCCAGAGTTACCGAAGGTGACACTTCTGGGAGAGAGGATGAGGAAAAATATAATGTCAGATCTAATGCTGAGGTGTTACTGGGTGAAACATCATATCCACATACGATAAATTTTGAAGAGTATCTAGGTGATTCTCCTGCAGTTAAAAGGCAAACTTCACCTTCTGTCAAGGAAAGAAGTATGGAATATTGCTGCATTGCCACCGAAAAATACAAATCCGATTCTGTGGTAGCTGAGACACCGCAGAGTGACAAGAATATGGTTGCATGCAAGAAAAATGATGAAAGTGCTACTGTGGATTCGACATCAACAGATGTAGTCAAGTTTTCTGCTTCTGATATTGAGATATTGGAGGGAAAAGTAATTACTGCAGGCAAAAACATGGAGCCAGATTATGAAGTACTTCAGAAGAGTTCTGCACAGGAAGAGCCTACCCCTGCTAGTGCTACTGATGGGGCAATGCAGGAAAGAGATAAAAAATATATAAAAATGTGGCAATTGATGTATAAGCATGCAGTGTTAGGTAACTCAGGGAAATGTGAAAGTAAGCTGCCTTTTAATGAGAAAGGCAGGGAAGAAAGCGGGCAAAATGATCTCATGATTAATGAAGTAAACAGCTGTTCTTGTCATAATCATTGCGAAACCAATCAGGATATGGATGATGAAAATAAGAATGCAATTGAGCTGGTGCAGAAAGCATTTGATGAAATTCTTCTCCCGGAGCCTGAAGATCTCTTTTCTGATGATCATTTCAAATCTGAAGGCATTGATTCAGATGAGCCACTCTCAGAAAAGAGTGAAGGTAAAAGAGAAGAAGTGAATACCTCAACATCTACAGAATCTCCTATAGAAGAACAGAGGATGGGGACTGAACCTCACCAAACAACACCAAAAAGCTGGAGCAATCTGAAAAAAATGATCCTCTTGAAACGGTTTGTAAAGGCATTAGAGAAGGTAAGAAACTTCAACCCACGAAGACCAAGTCATTTGCCTTCTGATGCTAACTTAGAAATAGAAAAAGTTTTTCTCAAGCACCAAACTGCAGAAGAGAAGAAAAATACTGAGGAATGGATGCTTGACTATGCTCTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACGTAGAGTGACACTTCTAGTAGAAGCTTTTGAAACAATTCTGCCATTTCAAGATGCTGAAAGTAGTCCATGGTCTTCTGCAACAATGGAACCTAAAGCAAATCCAATTCAATCCCTTGATGATTCCTCAAATCATGGCAAGGAAGAAGCATCATTTTCTCATAATAGTAATATGGAACTTGAGGATAATGCTGGTGATGATCCAATGCCAGAACTGCACAATCCTATTGTGCTCAAAGACATCTTTGATTATCCTCGGACTGAGATTGTCAAGCATATATCTGCATCTGAAGCTATTGAAGAAGACATATATGGAAACCGAAGTTTAGCTGGCAGTGATGATAATGATGAGAAAATCTCAACTGACGACAATAATATTTATCCTGTAGAAATCAAAGATAGCAGATCAAGTTCCTTAAATAAGCCAGTTGAAACTACAAGCAGCTGTCATGAGGAGGCTCCAACCAATGAAAAGGTCAGTGAATTTCCAGAAGACTTGATATCCAATGTGAATATAGAAAATCCAAATATCAAATCCAAATCACCTGGAATAGATGTTGAAACCAAGAAGCTGATTGGTGATAATGGGGAACAATTTTCCGTGTCTAAAAGTTTAATTCTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGAATGGTTCAGGAGCACCTGCTAACCTATTAGATGAACCAACAGCAGACAGGAAAGAAAGGATTGAAAAATCTAAGCTGGAAACTGAGACTCTTGAAGAGTTCCCTACACAGGAACAATCTGAAGCTCCCAAGAGTGCTGTTGTAGAACCTGAGACCCTGCCAGAGAAACAGCGCTACACAGGTCTGTGGTACTTGGTATATAAACACATGGTATCGGATATGGCTGAAAACAAGCCCAAGTCACTAATTGATGAGGCAGATGAGAAAGAGTCAGGGCATGAAGGCGGCAGAAAAAGAGGAACTTCCATCTCTCATGAAAGTACACCAATGACTAAGCAAGATAAGGAATTCAAGGACCATGTTGTAGATGATCCAGAAGTTGAACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCAGATGATAAGGACGACTTACCAGACAAAGAGTCACTTGCTTACAACACAATTTCAGACAACTCTAAACAGTCTGACAGAACTGAAAGAGTGTACAATGAAGGTCTGGAGAAAAAAGAAGAAAGAATGGAATCTAAAAATAGAACAATCCAAGAAAAAGAAGATGAAGAATCAGCACCAAAGGAGGGAAACAAAACAAACCAGCAATTGCCTAGAAGCTGGAGCAATCTTAAAAAGGTAATCCTGCTTAGGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGACCCAGATATCTACCTGTAGAGCCTGATTCAGAATCTGAGAGAGTTCACTTAAGGCATCAAGGCATGGAAGAAAGAAAAGGCACTGAAGAATGGATGCTTGATTATGCACTTAGACAGGTGGTTTCCAAATTAACCCCAGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCATGAAAAATTGA 3669 0.4007 MKDEIEGSYSDYDESQRVPGTKESISSLPENRGRLESKRKLKKVRSIRLGRLSSMRSSTRRGKPQYDDLIILSSVGTESLEGPTPIDMADASPNYMKATSSSHAKDSFQPKRKLKSSRSIKFVAVKGPKSTRKQSESTCGSDDQNGKSTCDASSKPQRVITRRLSFKPVRMLTKMPTFKAKNSSKSDSSLHRATCSSTLKDSHFPDHIDLPQEASTSQGVSSMKVCPYTYCSLHGHRHGNMPTLKRFVSMRRRMLKTQKTMKMDGQPVNRSKQFGNARKAAPKAQTVHSEDGRSHFQNMKKMASDSHIRPHGTPTSRVTEGDTSGREDEEKYNVRSNAEVLLGETSYPHTINFEEYLGDSPAVKRQTSPSVKERSMEYCCIATEKYKSDSVVAETPQSDKNMVACKKNDESATVDSTSTDVVKFSASDIEILEGKVITAGKNMEPDYEVLQKSSAQEEPTPASATDGAMQERDKKYIKMWQLMYKHAVLGNSGKCESKLPFNEKGREESGQNDLMINEVNSCSCHNHCETNQDMDDENKNAIELVQKAFDEILLPEPEDLFSDDHFKSEGIDSDEPLSEKSEGKREEVNTSTSTESPIEEQRMGTEPHQTTPKSWSNLKKMILLKRFVKALEKVRNFNPRRPSHLPSDANLEIEKVFLKHQTAEEKKNTEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETILPFQDAESSPWSSATMEPKANPIQSLDDSSNHGKEEASFSHNSNMELEDNAGDDPMPELHNPIVLKDIFDYPRTEIVKHISASEAIEEDIYGNRSLAGSDDNDEKISTDDNNIYPVEIKDSRSSSLNKPVETTSSCHEEAPTNEKVSEFPEDLISNVNIENPNIKSKSPGIDVETKKLIGDNGEQFSVSKSLILEGLVRSLRSNLNGSGAPANLLDEPTADRKERIEKSKLETETLEEFPTQEQSEAPKSAVVEPETLPEKQRYTGLWYLVYKHMVSDMAENKPKSLIDEADEKESGHEGGRKRGTSISHESTPMTKQDKEFKDHVVDDPEVELQQIEAIKMVEEAIDSILPDDKDDLPDKESLAYNTISDNSKQSDRTERVYNEGLEKKEERMESKNRTIQEKEDEESAPKEGNKTNQQLPRSWSNLKKVILLRRFIKALEKVRKFNPRGPRYLPVEPDSESERVHLRHQGMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVMPTMKN* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1267 1222 MobiDBLite consensus disorder prediction 991 1028 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 1 158 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 560 589 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 284 307 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 823 843 - -
Apr4g1267 1222 Pfam Plant calmodulin-binding domain 602 705 IPR012417 GO:0005516
Apr4g1267 1222 Pfam Plant calmodulin-binding domain 1115 1218 IPR012417 GO:0005516
Apr4g1267 1222 MobiDBLite consensus disorder prediction 1054 1125 - -
Apr4g1267 1222 PANTHER CALMODULIN BINDING PROTEIN PICBP 23 1220 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 590 615 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 711 731 - -
Apr4g1267 1222 Coils Coil 1087 1110 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 560 615 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 130 158 - -
Apr4g1267 1222 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 23 1220 IPR044681 GO:0005516
Apr4g1267 1222 MobiDBLite consensus disorder prediction 823 850 - -
Apr4g1267 1222 SMART CaM_binding_2 592 705 IPR012417 GO:0005516
Apr4g1267 1222 SMART CaM_binding_2 1104 1218 IPR012417 GO:0005516
Apr4g1267 1222 MobiDBLite consensus disorder prediction 262 331 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 711 757 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 991 1009 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 933 957 - -
Apr4g1267 1222 MobiDBLite consensus disorder prediction 1077 1116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1267 Apr-Chr4 11528385 11533380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1267 478 718 Calmodulin-binding Proteins AT5G04020 32.411 5.71e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1267 - - aprc:113861458 2394.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1267 4 11528385 11533380 Apr4g1267 4 11528385 11533380 ECH