Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1256 ATGGCGCCAAAACGAAAACCTTCACTACCAATCTCCATCGGTAACTGCGAGATTACGGTAGAGGCCAATCGTTTCACCTGCTGCTCCGATTCTGACAGTATTGTAATCTCTCTGCCCCGAAGCGGAAAGATCAAAGTATCAGGCGACGTGTCTGCAAAACACGGAAACGCTTCTGAGGATTTCAGGTCCGGAGATAAAGATCACGAGTTTGTGCTAGTTAATCCTAAAGATGTTGATGGAATAAGCAAGTCCTACCTTCAGGAGGTATTAAAGATGTATATGACGGAGCTACCTGGAATGAATTATGCTGCGAATACAGGAAAACAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATACAGAACACTACTTCTGAAATCCGCTTCTGTTGAAAATTCGGGAAAGGTTATAGCTGCAATCACATACCAAATCATCTCTGCTGATACAGAATATGCTGAGATCCCGCTTGCAGCTGTCAATTCAACCCATCAACGGAAGGGTTTTGGTCATCTATTGTTTCTAGAACTACGGAAGAGACTTCAAAGTGTTGGCATACGTTCTATTTTCTGCTGGGGAGACAAGGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTATATCAATCGCACAGGTTGATACCAAAGGAAGAGCCCGCAGGTTACCTGTAAAAGCTGATATTCGAAAATCATTATGCTTTCCTGGTGGTTCAACTCTGATGGTATGCCACCTAAGGAAAGAATTCTTAGCCGAGGATGCTAACTCTGTGAAGTGTCTTCCCTCACAGCTTCATCAGAATTCCTTTACATCTGCCATTGCTGAAGATGAGCAACTTGAGTTTTCAGGACAATTACATGTTGATTTGAAATTTCCAAATAGATCTTCCCATAGGACAGAATCAGATAAAAGGGAACCTAAGGCCTTGGTGAAAGATGGATCCTCAAGAGAATATGACAAACTCGGTGGATTTGACAGTCACAATCCTAAGTACTGCTGCAATGACATTGTTCCTTTTTCCAAAGTAAATGATGGCCGGCATGCCGCTTGTGCAGAAAGTTCGCAGGATGGAATTGATGGTAATGTGAATTATTGTTCGCATTCTACAAAAGGTGCGAAGAGGGCCTGGGAGGCCTCTTTATCCTCGTTGAAGTCAAAAAGAGTGAAGGGAAGCCAGTTGGTTGATTGTCGATCAGATTATAGCTGGGGGTTTATCTCAGAAACCGATAAGGTCAACCCGTGCTTTGTAGAAATTCCTCATGGTGATCCTTCTTTGACGACGACGAATTCTGAAAAATATACACAAGGTTATTTGTATTCAGAAGCTCCCATCAACAAAGGACTTCTATCGACTACACAATGCTTTAGAATTATGTTGATGAATATCGCTGATGATGCTAAGAAAACACAGCTTACAAAGGTGATTGAAGACCTTGGTGGAACTATTGTCGACGATGGGAGTATGACCACACATGTTGTCACGGGAAAAGTGAGAAAAACTCTGAATTTTTGTACCGCCCTCTGTTCAGGTGCTTGGGTGGTCTCATCAAGTTGGTTAAAAGAAAGTTTTCGTGAAGGCAAATTTGTTGATGCACTGCCTCACATACTGAATGATAAGGACTATCTTCTGAAGTACAGATGTGATTTAAAAACTGCAGTTTCCCGAGCAAAAGCCAACCCCCATGCTTTATTTAAAGGGTATAATATATGTATCGCGTCTCATGTTCAAACTCCTGCTAAAACACTGTCTGCAATTGTCAGGTCCGCAGGTGGTAATGTTGTTAGCGGACTTGAGAAAGTAAATCTAGCATCAACAACAATATTTGTGACATGCGAAGAAGACACAGAAGAAGCAATGATAGCTGCAAGGAAAGGTATACAGACTTTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTAGACTTGGAAGCTTCCCAGTTTGCAGAGTCCTTATGA 1965 0.4188 MAPKRKPSLPISIGNCEITVEANRFTCCSDSDSIVISLPRSGKIKVSGDVSAKHGNASEDFRSGDKDHEFVLVNPKDVDGISKSYLQEVLKMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSASVENSGKVIAAITYQIISADTEYAEIPLAAVNSTHQRKGFGHLLFLELRKRLQSVGIRSIFCWGDKESEGFWLKQGFISIAQVDTKGRARRLPVKADIRKSLCFPGGSTLMVCHLRKEFLAEDANSVKCLPSQLHQNSFTSAIAEDEQLEFSGQLHVDLKFPNRSSHRTESDKREPKALVKDGSSREYDKLGGFDSHNPKYCCNDIVPFSKVNDGRHAACAESSQDGIDGNVNYCSHSTKGAKRAWEASLSSLKSKRVKGSQLVDCRSDYSWGFISETDKVNPCFVEIPHGDPSLTTTNSEKYTQGYLYSEAPINKGLLSTTQCFRIMLMNIADDAKKTQLTKVIEDLGGTIVDDGSMTTHVVTGKVRKTLNFCTALCSGAWVVSSSWLKESFREGKFVDALPHILNDKDYLLKYRCDLKTAVSRAKANPHALFKGYNICIASHVQTPAKTLSAIVRSAGGNVVSGLEKVNLASTTIFVTCEEDTEEAMIAARKGIQTFSSEWFMNCVMRQELDLEASQFAESL* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1256 654 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 5 654 - -
Apr4g1256 654 SMART BRCT_7 561 641 IPR001357 -
Apr4g1256 654 SMART BRCT_7 446 526 IPR001357 -
Apr4g1256 654 Gene3D - 68 222 - -
Apr4g1256 654 SUPERFAMILY BRCT domain 556 643 IPR036420 -
Apr4g1256 654 ProSiteProfiles BRCT domain profile. 457 536 IPR001357 -
Apr4g1256 654 Gene3D BRCT domain 445 560 IPR036420 -
Apr4g1256 654 Gene3D BRCT domain 561 653 IPR036420 -
Apr4g1256 654 CDD NAT_SF 132 193 - -
Apr4g1256 654 SUPERFAMILY BRCT domain 456 538 IPR036420 -
Apr4g1256 654 PANTHER N-ACETYLTRANSFERASE 5 654 - -
Apr4g1256 654 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 213 IPR016181 -
Apr4g1256 654 ProSiteProfiles BRCT domain profile. 559 643 IPR001357 -
Apr4g1256 654 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 76 229 IPR000182 GO:0016407
Apr4g1256 654 Pfam Acetyltransferase (GNAT) family 132 207 IPR000182 GO:0016407
Apr4g1256 654 CDD BRCT_PAXIP1_rpt6_like 563 644 - -
Apr4g1256 654 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 456 533 IPR001357 -
Apr4g1256 654 MobiDBLite consensus disorder prediction 292 313 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Apr4g1256 RTT107_BRCT_5 1.1e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1256 - - gmx:100806087 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1256 4 11436326 11441514 Apr4g1256 4 11436326 11441514 ECH