Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1234 ATGGATCATTGTTCAAGAGGTGGGGTTCATGAATTCAACTTGGCTTCGAGAAAAGCAGAAGAAGCGGCTTGGAGACGCTATGAGGCAACTCAGTGGCTGGAAAGCCAAGTGGGTCCTCTTGGTATATCTAATCACCCTTCAGAGAGAGAACTTATTTCTTGCTTGAGAAATGGTCTCATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAGGTTGTGGATAGTCAAATAGCTTCACAGTCACTTACTTGGGATTCCCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTCCGCAACTTTCTTGTTGCAGTGGAAGAATTAAAGCTTCCAGCTTTCGAAGCCTCTGATCTTGAAAGGGATACACTAGAGATTGGATCAGCAGCAAAAGTGGTTGACTGCATTCTAGCGCTCAAGTCATTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATCCAATTACAAACACATAAAATCTCCTTTACTTATGCTGTCGGCCAGTAGAATGCATTCAAGAGCTGCAGCTGCATTACCCTCTGATGCCTGTAGGCGCTTGGATTTGTCTGCCACACTGGAAAAAATGCCTCCCGTAGAGAGTGATTTTCCGAAACGAGAAGCAGAAATTGTGGAATCACTTGTCAAGCTACTGGTTGACCGTATGTTTGATGCCAAAGAAAATATTGATGGAAACATTATTGCTTCTCTTCGAAATGAACACCTGGTAGCGCAGGATCCAATAAAGGTATTTAATCAGATAATGGCATGTTGTAATGCGGAGCAGACTCCTACAAGGTTCCACGAGTTGCTGTTGATGCCAAAGGATTTTGTGAAAGAAAAGAGTAGCTTACCACCTCATGCACCTGAAAGTTCCAAGTGTTTGCGAGCTTGTCCTGCAAAATGCAAGTGCAATCAAGAGCATCTTTTAGACATGCAGGAAAAAGAGCTTATGGATCTCAAGGCTTTGAAGTTGAAAGTTAAGAAAGAGTTTGAAGAGATGCAGTCAGAGTTTCAGAGGTTTTTTAATGATATTGGAAGTCAAATACAGGAGATGTCAACTAAATCTCTCGGATATCACAGAGTGGTAGAAGAGAATAGGAAACTGTACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCTCATTCAAGGCTGAATCCAAGAATGTTGTTGATTTCATTGGGGAAGATGGTTCTCTATTCATTTTAGATCCAACGAAAACACTAAAAGATGGAAGGAAACTTTTCCAGTTTAATCGGGTTTTTGGTCTAACAGCTGGTCAAGATGAGGTTTATAGGGATACTCAACCATTAATTAGATCTGTGATGGATGGGTACAATGTTTGTATTTTCGCTTACGGTCAAACTGGATCAGGGAAGACTCACACTATGAGTGGTCCTTCAGGTGGTAGTGGAACATCTAAGGATATGGGAATCAATTATCTGGCTCTTAATGATCTGTTTCAAATGTCTAATGAAAGGAGGGACATCATAAACTATGAGATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTTAGAGACCTACTTGCAGAGGACAAAACAGACAACAAATTAGAAATCCGGAGCTGCAATGATGATGGGTTGAGCCTTCCTGATGCTAGATTGCGTTCAGTGAATTCCACAATTGACGTCATCACCCTCATGAAACTTGGTGAGGTTAATCGTGCTGTCAGTTCAACTGCAATCAACAATAGGAGTAGTCGCTCCCACAGTGTACTTACTGTACATGTTCATGGCAAAGATACATCTGGGAGCTCCATTCGGAGTTGCCTGCACTTAGTTGACCTTGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAATCTCTTTCCTGTTTAGGAGATGTGATCACAGCCTTGGCTCAAAAGAATTCTCACATCCCTTACAGGAACAGCAAGCTCACACTTCTTTTGCAGGACTCGTTAGGTGGACATGCTAAAACGTTGATGTTTGCTCATGTAAGTCCAGAAGCAGATTCATTTGGTGAAACAGTGAGTACTTTGAAGTTTGCTCAGCGGGTTTCCACTGTTGAACTGGGGGCAGCCCGTTTGAACAAAGAAGGCAGTGAGGTTATGCAGCTTAAAGAACAGGTTGAGAACCTTAAGCTTGCATTGGCAAACAAGGAAGCTCAGAGAGCAATGTTCAATAGAATCAAGGAACCACACACTCCATTAGAGAAACCAACACTGGTGTCTGAGAAAACTCCATTGCCCCCTCGAAGACTTAGCATTGAGAATTGCAGCGCTGTAAAGACTGACAAATCTGTGAATCCTGAGGATAAAAGTGGAGTCAAATCACCTTTGTTACCTCGTTCAAGAAGATTAAGCTTGGAAGGTTCAAAAAATATCAAGAAAGACAGTCTACAAACAAAAGCATCAGCTGATATAAACAAAGCTTTACAGTATGAGTCAGCATATCTGCAGAAACATCGTTCACTGCAAGATCCAGAAGCCGTGTCAAAGCTAAATAGCCATTTCAGCAATGGCAACTCCAGGTCAGAGTTGCATGCCAAAACTCCTCGAAGTCCTATAAGCATTTCCAATCAGAAGAGATTGATAAAAGATGGTGGAATGCAAATTCACCCTCTTAAACTACCTCAGACACCTGAACCACCAATGCTGGATAGAAATGATGCACATTTTGCTGATTCCCAGACAACTAAGGCAATCAGTGGAACAAATGGAAAGGGATCTCAGATAAGAAGATCATTGAGAACAATTAGCAAACTTATCAATGGTCCTGATAAGAGGAGCCAACCAATTTTGGTTGAAGTGAAGTCACCCATCAAGGGATCTGGCCATAAAAATCATGTAAAATCCCCACTAACAGCTGTTGAGAAGACTAAAAGAAGGCAATCTCTAACGGGAATTCAAGCACCAGGGCCAAACAACTCTCGTAGATCTTCTCTTGGAGGGAAGCCAATAGTATCATATGACAAGGACAAAAATGCTAGAACTCCTCCAATTCATTCAGAGACTGCAAAAAGGTGGCTATAG 3090 0.4159 MDHCSRGGVHEFNLASRKAEEAAWRRYEATQWLESQVGPLGISNHPSERELISCLRNGLILCNAINKIHPGAVPKVVDSQIASQSLTWDSQPLPAYQYFENVRNFLVAVEELKLPAFEASDLERDTLEIGSAAKVVDCILALKSFQELKQMNNQNGSNYKHIKSPLLMLSASRMHSRAAAALPSDACRRLDLSATLEKMPPVESDFPKREAEIVESLVKLLVDRMFDAKENIDGNIIASLRNEHLVAQDPIKVFNQIMACCNAEQTPTRFHELLLMPKDFVKEKSSLPPHAPESSKCLRACPAKCKCNQEHLLDMQEKELMDLKALKLKVKKEFEEMQSEFQRFFNDIGSQIQEMSTKSLGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFKAESKNVVDFIGEDGSLFILDPTKTLKDGRKLFQFNRVFGLTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGSGTSKDMGINYLALNDLFQMSNERRDIINYEIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGLSLPDARLRSVNSTIDVITLMKLGEVNRAVSSTAINNRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKEGSEVMQLKEQVENLKLALANKEAQRAMFNRIKEPHTPLEKPTLVSEKTPLPPRRLSIENCSAVKTDKSVNPEDKSGVKSPLLPRSRRLSLEGSKNIKKDSLQTKASADINKALQYESAYLQKHRSLQDPEAVSKLNSHFSNGNSRSELHAKTPRSPISISNQKRLIKDGGMQIHPLKLPQTPEPPMLDRNDAHFADSQTTKAISGTNGKGSQIRRSLRTISKLINGPDKRSQPILVEVKSPIKGSGHKNHVKSPLTAVEKTKRRQSLTGIQAPGPNNSRRSSLGGKPIVSYDKDKNARTPPIHSETAKRWL* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1234 1029 PRINTS Kinesin heavy chain signature 455 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 SMART kinesin_4 380 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 MobiDBLite consensus disorder prediction 978 1002 - -
Apr4g1234 1029 MobiDBLite consensus disorder prediction 960 1029 - -
Apr4g1234 1029 Coils Coil 715 742 - -
Apr4g1234 1029 Coils Coil 313 340 - -
Apr4g1234 1029 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Apr4g1234 1029 PANTHER KINESIN-LIKE PROTEIN KIN-14L 5 1019 - -
Apr4g1234 1029 MobiDBLite consensus disorder prediction 1009 1029 - -
Apr4g1234 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 707 IPR027417 -
Apr4g1234 1029 SUPERFAMILY Calponin-homology domain, CH-domain 22 155 IPR036872 -
Apr4g1234 1029 ProSiteProfiles Kinesin motor domain profile. 382 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 Gene3D Kinesin motor domain 324 710 IPR036961 -
Apr4g1234 1029 Pfam Calponin homology (CH) domain 25 144 IPR001715 GO:0005515
Apr4g1234 1029 Pfam Kinesin motor domain 388 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g1234 1029 SMART ch_5 25 145 IPR001715 GO:0005515
Apr4g1234 1029 MobiDBLite consensus disorder prediction 750 815 - -
Apr4g1234 1029 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 1019 - -
Apr4g1234 1029 Gene3D - 11 167 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1234 Apr-Chr4 11167360 11174307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1234 312 708 Calmodulin-binding Proteins AT5G65930 39.454 2.26e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1234 K10406 - gmx:100786642 1644.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1234 4 11167360 11174307 Apr4g1234 4 11167360 11174307 ECH