Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1233 ATGGGTGACATTGCTTCTGGAGTGGGCACCATATTATTGGAGAAGCTTGCAACCAAAGCTTATAATGAGATTGTTTTGGCATGGGGTCTCAAAGATGATGTAGAAAGGCTTCAAGAGTCTCTGAAACTCGTCAATGCCCTTCTTTTAGATGCTGAAGACAAGCAATTCAAAGACCAAAGAGTCACCCCATGGTTGCAACCACTTAAACGTGCATTCTATGATGCAAATATTATATTGGATGAAATTGAGTGCGAAGCAAATACAAATAAAGCAATCAAAATGCATGGATGTGTTGCTCAAAAGGTGCGTCAATTTTTCTCATGCTCTAATCCACTTGTATTTCGTGTCAAAATGGCTCGCAAAATTAAGGACATAAGAGAAAAGATTGATGAGATTGCACTCAATGGAAAGAAGTTCGATCTCATTCCACGTTCTACAAATGACATGGCTCTCAATAAAATGTTACCAAGGAGGGAAACCCATTCTTCTCTGCCTTCACGTATGACAGGTAGATATGAAGAGAAGTCACATATCATAAGTTTATTGATGAGAGAACCATCACAATCACAAAGCAAAAATGTTGATGTCATCCCAATTGTTGCAATGGGAGGGTGTGGGAAGACCACACTTGCCCAATTGGTGTTCAACGATTCAAGAATAGCTGATCATTATGATTTAAAATTGTGGGTGCATGTGTCGCAAGATTTTGATGTTAAAAGAATAATATCAAAAATTGTTACACAAGTAGATGATACAAAAGGCAGAGGCGGTGAAGACGTGACCTTAGAAATGTTGAAAACTCTTCTTCATGACAAATTATATGAGAAGAAATTTTTACTTGTCCTTGATGACATGTGGAATGAAAATGCTAAAATATGGCATGATCTACGGGATCTCCTGTTGGATACAATTGGTGAAAGGAACAAAAATGATTGCAAAATCATAGTGACTACTCGTAGTGACAGAGTTGCTGATATTGTGAAGACTGTTACTAAAATCAACTTACAAGTACTCCCAGAAGAGGAATGTTTGCAGTTATTTTTTAAGTGTGCCTTTCAAGAAGAGGGGGAAGCAAATAAACGCCCCAGGCTTCAAGAAATTGGGAAGGAAATTGTTGCAAAGTGCAAAGGGTTGCCACTAGCCATAGTGACTTTAGGGTGCATTCTTAGGTCACAAGAAGATGAAAATGAGTGGAAAAGAATCCGAGATAGCAAGATATGGGAAATAGATAATAAAAAAGATGATGAAATATTACCAGCATTAAGGCTAAGCTATTCTCAATTGCCATCTCCTCTGAAGCAATGTTTTTCTTATTGTGCTATTTTCCCTAAAGGTCATGAATATTGTCCAATAGAATTGATTCCAATTTGGATGGCCCACGGACTCCTCCAACCCACGAATGAAAATGAAGATCCAGAGTGTCTTGGAGAGTTATATTTCAGGCAATTAATTTCAATGTCCTTCTTTCAATTTGAAGATGAATTCGGTTCACCTTTTCAGGACGAAGTACTGAAAGTTTTGGGCTATGAAGGTTACAAAATGCATGATCTGATCCATGATCTTGCTATGTCGACGATGAATGGTGAGACTACAGTGATGAGTAGTGCATCTACACATGTCAATGAAAAAGTGCGACATATATCAATTTCAATCAATTCAGATCAATTGCCTTTGTTACCCCTCAAGAAAAACAAGGTTCAATCATTTGGAAGATGGCACACACAAGGATCTATCACCACGACAGAACCATTTGTAAAGTGGATCTTTAAAGAATTCAAGTACTTAAGGGTGTTGGATTTGCAAGATTTGGAATTTCAGTTCCTGCCTGATTGCTTCGACAAGATGAAGCATTTGAGATATCTTAATCTGAGTCTTTGCTCTGAGTTGAAAAAACTCCCCAAGTCCATTTCCAAGCTCTATAATCTCCAGACTTTAATTCTTGACGGCTGTGACACACTTGAAGAGTTACCCAAAAACTTGAGGAACCTTATCAACCTTCGAATTTTTTTTATTACTGCACAAATTAGAAATCTCTGCTTTGTAGATATAAGGTTCTTTAGATCTCTTCAGATTTTAATGATTTCCAGTTGTGATAACTTAGAAGTCATACCGTGTGATTTATCACATTTAGTTTCTTTGAAGAAGCTGATAATTATGGGATGTGAAAAGCTAGTTCGTTTTGAAGACGAAGGTGAAAATGAAGGAAGAGGAAAGCAAAATGAAGTTGCCAAGGATATGAATCTTCAAACATTTGTTATTCTTGAATCGCCCGAGTTGATCAACTTACCCAACTGGCTCCGAAGATCTACCAAGACTTTACAACAAATTTGTATTTCTGAAACAAGTTTAACAGCATTGCCAGAATGGCTTCCAAATGCAACATCACTTAACAGTCTTTACATTAGAGATTGTGAAAAGTTGTTGTCACTGCCTGAGAATATGGATCACTGTCGTAGCCTTCAAAAGTTAGTAATAATTGGTTGCCGAAATCTGAGTGAAAGGTACGGAAAGTATGTAGGCCCAGAACGGAGCAAAATAGCTCATGTCCCAAACGTCTATGTAAGTTTCTGCTAA 2574 0.3757 MGDIASGVGTILLEKLATKAYNEIVLAWGLKDDVERLQESLKLVNALLLDAEDKQFKDQRVTPWLQPLKRAFYDANIILDEIECEANTNKAIKMHGCVAQKVRQFFSCSNPLVFRVKMARKIKDIREKIDEIALNGKKFDLIPRSTNDMALNKMLPRRETHSSLPSRMTGRYEEKSHIISLLMREPSQSQSKNVDVIPIVAMGGCGKTTLAQLVFNDSRIADHYDLKLWVHVSQDFDVKRIISKIVTQVDDTKGRGGEDVTLEMLKTLLHDKLYEKKFLLVLDDMWNENAKIWHDLRDLLLDTIGERNKNDCKIIVTTRSDRVADIVKTVTKINLQVLPEEECLQLFFKCAFQEEGEANKRPRLQEIGKEIVAKCKGLPLAIVTLGCILRSQEDENEWKRIRDSKIWEIDNKKDDEILPALRLSYSQLPSPLKQCFSYCAIFPKGHEYCPIELIPIWMAHGLLQPTNENEDPECLGELYFRQLISMSFFQFEDEFGSPFQDEVLKVLGYEGYKMHDLIHDLAMSTMNGETTVMSSASTHVNEKVRHISISINSDQLPLLPLKKNKVQSFGRWHTQGSITTTEPFVKWIFKEFKYLRVLDLQDLEFQFLPDCFDKMKHLRYLNLSLCSELKKLPKSISKLYNLQTLILDGCDTLEELPKNLRNLINLRIFFITAQIRNLCFVDIRFFRSLQILMISSCDNLEVIPCDLSHLVSLKKLIIMGCEKLVRFEDEGENEGRGKQNEVAKDMNLQTFVILESPELINLPNWLRRSTKTLQQICISETSLTALPEWLPNATSLNSLYIRDCEKLLSLPENMDHCRSLQKLVIIGCRNLSERYGKYVGPERSKIAHVPNVYVSFC* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1233 857 Pfam NB-ARC domain 191 426 IPR002182 GO:0043531
Apr4g1233 857 Gene3D - 337 429 IPR042197 -
Apr4g1233 857 CDD RX-CC_like 5 133 IPR038005 -
Apr4g1233 857 Gene3D Ribonuclease Inhibitor 531 835 IPR032675 -
Apr4g1233 857 Pfam Rx N-terminal domain 11 97 IPR041118 -
Apr4g1233 857 Gene3D - 149 334 IPR027417 -
Apr4g1233 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 439 IPR027417 -
Apr4g1233 857 SUPERFAMILY L domain-like 513 831 - -
Apr4g1233 857 PANTHER OS08G0543100 PROTEIN 29 833 - -
Apr4g1233 857 PANTHER DISEASE RESISTANCE PROTEIN RP 29 833 IPR044974 GO:0006952
Apr4g1233 857 Gene3D - 10 123 - -
Apr4g1233 857 Coils Coil 34 54 - -
Apr4g1233 857 PRINTS Disease resistance protein signature 196 211 - -
Apr4g1233 857 PRINTS Disease resistance protein signature 272 286 - -
Apr4g1233 857 PRINTS Disease resistance protein signature 375 389 - -
Apr4g1233 857 PRINTS Disease resistance protein signature 613 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1233 Apr-Chr4 11156761 11159334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1233 595 850 WRKY Transcription Factor Family AT5G45050 25.540 5.69e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1233 - - aprc:113862174 1444.48