Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1232 ATGGGTGAAATTGTTTCCGGAGTGGGCAACATATTATTGGAGAAGCTTGCAACCAAAGCTTATAATGAGATTATCTCGGCATGGGGTCTCAAAGATGATGCAGAGAGGCTTCAAGAGTCTGTGAAACTCGTCAATGCCCTCCTTTTAGACGCTGAAGACAAGCAATTCAAAGACCAAAGCATCACCGCATGGTTGCAACTGCTTAAACGTGCATTCTATGATGCAAATATCATATTGGATGAAATTGAGTGTCAGGCAAATATAAGTAAAGTGATGAAAATGCATGGATGTGTTTCTCAAAAGGTGCGTCAATTTTTCTCAAGTTCTAATCCACTTGTATTTCGCGTCAAAATGGCTCACAAAATTAAGGACATAAGAGAAAAGATTGATGAGATTGCACTCAATGGAAACAAGTTCGGTCTCATTCAACGTTCTACAAATGACATGGCTCTCCATAAAATGTTACCATGGAGGGAGACCCATTCTTCTCTACCTTCACGTGTAACAGGTAGAGATGAAGAGAAGGAACATATCATAAGTTTATTGATGAGAGAACCGTCACAATCACAAAGCAAAAGTGTTGATGTCATCCCAATTGTTGCAATGGGAGGGTGCGGGAAGACCACGCTTGCCCAATTGGTGTTCAACGATTCAAGAATAGCTGATCATTATGATTTAATATTGTGGGTGCATGTGTCACAAGATTTTGATGTTAAAAGAATAATATCAAAAATTGTTACACAAGTAGATGATACAAAAGGCAGAGGCGGTGACGACGTAATCTTAGGAAGGTTGAGAACTCTTCTTCATGAGAAACTATATGAAGACATGGCCTTAGAAAGGTTGAAGACTCTTCTTCGTGAGAAACTATATGAGAAGAAATTTTTACTTGTCCTTGATGACATGTGGAATGAAAATGCTAAAAGATGGCATGACCTACGGGATCTCCTGTTGGATACAATTAGTGAAAGGAACAAAAATGATTGCAAAATCATAGTGACTACTCGTAGCGAGGGAGTTGCTGATATTGTGAAGACTGTTACTAAAATCAGCTTACAAGAACTTCCAGAAGAGGAATGTTTGCAGTTATTTTTTAAGTGTGCCTTTCAAGAAGAGGGGAAAGCAAATCAATGCCCTAGACTTCAAGAAATTGGGAAGGAAATTGTTGCAAAGTGCAAAGGGTTGCCACTAGCCATAGTGACTTTAGGGTGCATTCTTAGGTCACAAGACGATGAAAATGAGTGGAAAAGAATACGAGACAGCGAGATATGGGAAATAGATCATCAAAAAGGTGAAATCTTACCAGCATTAAGGCTAAGCTATTCTCAATTGCCATCTCCTCTGAAGCAATGTTTTTCTTACTGTGCTCTTTTCCCTAAAGGTCATGAATATAGGCCAATAGAATTGATTCCAATTTGGATGGCACAGGGACTCCTCCAACCCACGAATGAAAATGAAGATCCAGTGTGTCTTGGAGAGTTATATTTCAGGCAATTAATTTCATTGTCCTTCTTTCAATCTGAAGATTTTGAAGATGAATTCGGCTCACCTTTTAAGTACGAAGTAGGGAAAGTCTTGGGCGTTGGTCGTTACAAAATGCATGCTCTGATCCATGATCTTGCTATGTCGACGATGCATGGTGAGACTACAGTGATGAGTAGTGCATCTACACATGTCAATGAAAAAGTGCGACATATATCATTTTCAACCATCCCAGACCAATTGCTTTCGCTATCCCTCAAGAGAAACAAGGTTCAATCATTTGGAAATTGGCACACACAAGGATCTATCACCACGACAGAACCATTTGTAAAGTGGATGTTTAAGGAATTCAAGTACTTGAGGGTGTTGGATTTGCAATCTTTGGCATTTCTGTTCCTGCCTGATTGCTTCGACAAGATGAAGCATCTGAGATATCTTAATCTGAGTGAATGCTCTGAGTTGAAAAAACTCCCCAACTCCATTTCGAAGCTCTATAATCTCCAGACTTTAATTCTTGTCGGCTGTAACGCACTTGAAGAGTTACCCAAAAACTTGAGGAACCTTTTCAACCTTCGAATTTTGATGATTACTGCACAAATCACAAATCTCTGCTTTGTAGATATAAGGTTCTTCAGTTATCTTCAGATTTTAACAATTTTCAGTTGTTATAATTTAGAAGTCATGCCGTGTGATTTATCACATTTGGTTTCTTTGAAGAAGCTGGTAATCATGGATTGTGAAAAGCTAGTTCGTTTTGAAGACGAAGTTGAAAATGAAGGAAGAGGAAAGCAAAATGAAGTTGCCAAGGAAATGAATCTTCAAATATTTGCTATTGCTGGATCGCCCATGTTGATAAACTTACCCAACTGGCTTCAAAGATCTGCCAAGACTTTACAACAAATTTGTATTTGGGATACAAGTTTAACAGCATTGCCAGAATGGCTTCCAAATGCAACATCACTTAACAGTCTATACATTTTAGATTGTGAAGAGTTGTTGTCACTGCCTGAGAATATGGATCACTGTGGAAGCCTTCAAAAGTTAGGAATAAGTGGTTGCCCAAATCTGCGTGAAAGGTACAAATGGGATGTAGGCCCAGAATGGAGCAAAATAGCTCATGTCCCAAATGTCTATGTAAGTTTCTGTTAA 2631 0.3884 MGEIVSGVGNILLEKLATKAYNEIISAWGLKDDAERLQESVKLVNALLLDAEDKQFKDQSITAWLQLLKRAFYDANIILDEIECQANISKVMKMHGCVSQKVRQFFSSSNPLVFRVKMAHKIKDIREKIDEIALNGNKFGLIQRSTNDMALHKMLPWRETHSSLPSRVTGRDEEKEHIISLLMREPSQSQSKSVDVIPIVAMGGCGKTTLAQLVFNDSRIADHYDLILWVHVSQDFDVKRIISKIVTQVDDTKGRGGDDVILGRLRTLLHEKLYEDMALERLKTLLREKLYEKKFLLVLDDMWNENAKRWHDLRDLLLDTISERNKNDCKIIVTTRSEGVADIVKTVTKISLQELPEEECLQLFFKCAFQEEGKANQCPRLQEIGKEIVAKCKGLPLAIVTLGCILRSQDDENEWKRIRDSEIWEIDHQKGEILPALRLSYSQLPSPLKQCFSYCALFPKGHEYRPIELIPIWMAQGLLQPTNENEDPVCLGELYFRQLISLSFFQSEDFEDEFGSPFKYEVGKVLGVGRYKMHALIHDLAMSTMHGETTVMSSASTHVNEKVRHISFSTIPDQLLSLSLKRNKVQSFGNWHTQGSITTTEPFVKWMFKEFKYLRVLDLQSLAFLFLPDCFDKMKHLRYLNLSECSELKKLPNSISKLYNLQTLILVGCNALEELPKNLRNLFNLRILMITAQITNLCFVDIRFFSYLQILTIFSCYNLEVMPCDLSHLVSLKKLVIMDCEKLVRFEDEVENEGRGKQNEVAKEMNLQIFAIAGSPMLINLPNWLQRSAKTLQQICIWDTSLTALPEWLPNATSLNSLYILDCEELLSLPENMDHCGSLQKLGISGCPNLRERYKWDVGPEWSKIAHVPNVYVSFC* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1232 876 Pfam NB-ARC domain 173 441 IPR002182 GO:0043531
Apr4g1232 876 Gene3D - 354 445 IPR042197 -
Apr4g1232 876 SUPERFAMILY RNI-like 572 868 - -
Apr4g1232 876 Gene3D - 153 351 IPR027417 -
Apr4g1232 876 Pfam Rx N-terminal domain 11 97 IPR041118 -
Apr4g1232 876 PANTHER DISEASE RESISTANCE PROTEIN RP 24 853 IPR044974 GO:0006952
Apr4g1232 876 CDD RX-CC_like 10 133 IPR038005 -
Apr4g1232 876 PRINTS Disease resistance protein signature 196 211 - -
Apr4g1232 876 PRINTS Disease resistance protein signature 392 406 - -
Apr4g1232 876 PRINTS Disease resistance protein signature 632 648 - -
Apr4g1232 876 PANTHER OS08G0543100 PROTEIN 24 853 - -
Apr4g1232 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 455 IPR027417 -
Apr4g1232 876 Coils Coil 34 54 - -
Apr4g1232 876 Gene3D Ribonuclease Inhibitor 554 759 IPR032675 -
Apr4g1232 876 Gene3D - 10 123 - -
Apr4g1232 876 Gene3D Ribonuclease Inhibitor 760 857 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1232 Apr-Chr4 11146652 11149282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1232 190 850 WRKY Transcription Factor Family AT5G45050 22.734 8.27e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1232 - - aprc:113862174 1729.53